New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1907210 =	42 (0.830)	3 (0.060)	3/248	NT	6.7%	coding (529/951 nt)	PP_1707	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	1907243 =	43 (0.890)					coding (496/951 nt)	PP_1707	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein

GCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAACGGCCGGCGCGAACGAAGCGGTCACCG  >  NC_002947/1907096‑1907376                                                                                                                                                     |                                                                                                                                      gcgcCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCTCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTACGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCtgt                                                                                                                                      <  6:25062/149‑1 (MQ=255) ccggccgttgggccaccagcaccacgccgctggcaccgctgccactggcccggcaggtgtcgggcatgcgcgtgggcatcgtcggcatgggccgggtcgggcgggcggtagcacAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCtgt                                                                                                                                      >  5:248858‑M1/115‑149 (MQ=255)      tCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTAc                                                                                                                                 >  2:228290/1‑149 (MQ=255)                      ccgcTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCgg                                                                                                                 <  2:215854/149‑1 (MQ=255)                                gATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCcga                                                                                                       >  4:151859/1‑149 (MQ=255)                                          tCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCCCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCAc                                                                                             <  1:228290/149‑1 (MQ=255)                                           cGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGAcc                                                                                                                    >  4:199794/1‑125 (MQ=255)                                           cGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGAcc                                                                                                                    <  3:199794/125‑1 (MQ=255)                                           cGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCAcg                                                                                            >  7:162039/1‑149 (MQ=255)                                                     ggCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGAGCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGcc                                                                                    <  7:210245/147‑1 (MQ=255)                                                               agcagATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCg                                                                        >  4:313846/1‑149 (MQ=255)                                                                 cagATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCggg                                                                      >  4:185014/1‑149 (MQ=255)                                                                      cTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGt                                                                 >  8:11610/1‑149 (MQ=255)                                                                       tGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTg                                                                >  8:243549/1‑149 (MQ=255)                                                                       tGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTg                                                                >  3:209129/1‑149 (MQ=255)                                                                         ccTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGt                                                                 <  8:162039/146‑1 (MQ=255)                                                                              aaCCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAACTGGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCg                                                          >  1:84621/1‑149 (MQ=255)                                                                                 ccGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGc                                                      >  5:158184/1‑149 (MQ=255)                                                                                   gTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGt                                                                 <  2:93745/136‑1 (MQ=255)                                                                                   gTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGt                                                                 >  1:93745/1‑136 (MQ=255)                                                                                       ggCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAgcgg                                                >  4:211278/1‑149 (MQ=255)                                                                                           caTCCAGTGCCTGTAGATCGGTGAAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCgtg                                            <  5:79448/149‑1 (MQ=255)                                                                                            aTCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCgtgg                                           >  6:4647/1‑149 (MQ=255)                                                                                                    ccTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCtggt                                    <  5:4647/148‑1 (MQ=255)                                                                                                    ccTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCCGCCCATGCCGACGATGCCCCCGCGCATGCCCGCCCCCAGCCGGGCCCGTGGCAGCGGTGCCCGCGGGGTGGTGCtggtg                                   >  1:292495/1‑149 (MQ=255)                                                                                                     cTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCtggtgg                                  <  3:185014/149‑1 (MQ=255)                                                                                                        tAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGcc                                >  2:274291/1‑148 (MQ=255)                                                                                                           aTCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAAc                            >  5:57945/1‑149 (MQ=255)                                                                                                             cGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCa                                                             <  5:238099/114‑1 (MQ=255)                                                                                                             cGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCa                                                             >  6:238099/1‑114 (MQ=255)                                                                                                              ggTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACCCCAGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAAcggc                         >  2:279537/1‑149 (MQ=255)                                                                                                                tgtAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCgtg                                            <  5:105497/128‑1 (MQ=255)                                                                                                                tgtAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCgtg                                            >  6:105497/1‑128 (MQ=255)                                                                                                                  acagcgggcggcagccttcggttgcccgatccgctGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAAcggccgg                      >  5:248858‑M2/36‑149 (MQ=255)                                                                                                                     CGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAACGGCCGGcgcg                  >  2:84621‑M1/1‑149 (MQ=255)                                                                                                                      cgggcggcagccttcggttgcccgatccgctGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCgt                                             <  2:124473‑M2/91‑1 (MQ=255)                                                                                                                      cgggcggcagccttcggttgcccgatccgctGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCgt                                             >  1:124473‑M2/32‑122 (MQ=255)                                                                                                                        aTCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCAAGCCGACGATGCCCACACGGATGCCCCACACCAGCCGGGCCAGAGGCAGCCGTGCCACCGGCCTGGTGCTGGTGGCCCAACGGCCGGCGcgaac               >  2:278768/1‑149 (MQ=255)                                                                                                                            ggCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAACGGCCGGCGCGAACGAAg           <  1:274291/149‑1 (MQ=255)                                                                                                                              cAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAACGGCCGGCGCGAACGAAGCg         >  6:26869/1‑149 (MQ=255)                                                                                                                                aC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAACGGCCGGCGCGAACGAAGCGGt       <  6:108539/149‑1 (MQ=255)                                                                                                                                   cGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGCCGATGCCCACGCGCCTGCCCGCCACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGGGGTGCTGGTGGCCCAACGGCCGGCGCGAACGCAGCGGTCa     >  5:30367/1‑149 (MQ=255)                                                                                                                                    gAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAACGGCCGGCGCGAACGAAGCGGTCAc    <  7:243549/149‑1 (MQ=255)                                                                                                                                    gAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAACGGCCGGCGCGAACGAAGCGGTCAc    <  3:313846/149‑1 (MQ=255)                                                                                                                                    gAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAACGGCCGGCGCGAACGAAGCGGTCAc    <  3:151859/149‑1 (MQ=255)                                                                                                                                     aaGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCTCGCGCATGCCCGACACCTGCCGGGCCAGTg                                                                <  1:28498/88‑1 (MQ=255)                                                                                                                                     aaGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTg                                                                >  2:28498/1‑88 (MQ=255)                                                                                                                                      aGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAACGGCCGGCGCGAACGAAGCGGTCACCg  <  7:11610/149‑1 (MQ=255)                                                                                                                                      aGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAACGGCCGGCGCGAACGAAGCGGTCACCg  <  5:26869/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                      GCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAACGGCCGGCGCGAACGAAGCGGTCACCG  >  NC_002947/1907096‑1907376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.