New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 211206349 (0.970)5 (0.100) 5/246 NT 9.7% coding (2223/4899 nt) PP_1882 membrane protein
?NC_002947 = 2112086 46 (0.960)coding (2200/4899 nt) PP_1882 membrane protein

CGTGCCTGGCGGGTGGATCGGACGTTCATGCCGTTGCGGTTCTGCACCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCGGTAACGCTCTCCTGTATCCGGTTGCCGTACGCATCGTACTGGATGGCCA  >  NC_002947/2111920‑2112211
                                                                                                                                               |                                                                                                                                                       
cGTGCCTGGCGGGTGGATCGGACGTTCATGCCGTTGCGGTTCTGCACCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCAc                                                                                                                                                    <  6:252159/149‑1 (MQ=255)
 gTGCCTGGCGGGTGGATCGGACGTTCATGCCGTTGCGGTTCTGCACCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCAcg                                                                                                                                                   <  2:302787/149‑1 (MQ=255)
  tGCCTGGCGGGTGGATCGGACGTTCATGCCGTTGCGGTTCTGCACCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCAcgt                                                                                                                                                  >  1:7456/1‑149 (MQ=255)
   gCCTGGCGGGTGGATCGGACGTTCATGCGGTTGCGGTTCTGCACCTGGGGTCGGGCTTTCAGTCTCCCGCCTGCTCGCCAGCTGTACCGAAGCGGGCCCTGGTGATCGGCGTTGCGGATCGGGTCCAGATCGTTGTGCTGCTCCCcgtc                                                                                                                                                 >  8:210727/1‑149 (MQ=255)
     cTGGCGGGTGGATCGGACGTTCATGCCGTTGCGGTTCTGCACCTCCGGTCGGGATTTCAGTCTCCCGCCTTATCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCAAcgtcgt                                                                                                                                               >  1:155575/1‑149 (MQ=255)
              ggATCGGACGTTCATGCCGGTGCGGTTCTGCACCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGa                                                                                                                                      <  4:146111/149‑1 (MQ=255)
                 tCGGACGTTCATGCCGTTGCGGTTCTGCACCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCaccatcggcccggacgacgtg                                                                                                                                    >  3:265776‑M1/1‑127 (MQ=255)
                  cGGACGTTCATGCCGTTGCGGTTCTGCACCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGACCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGATGCTCCACGTCGTCCGGGCCGA‑‑TGGt                                                                                                                                >  8:232148/1‑149 (MQ=255)
                    gACGGTCATGCCGTTGCGGTTCTGCACCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGCGCCGA‑‑TGGTgc                                                                                                                              >  6:300346‑M2/1‑147 (MQ=255)
                            tGCCGTTGCGGTTCTGCACCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCaccatcggcccggacgacgtggagcagcacaac                                                                                                                        <  1:179656‑M1/149‑34 (MQ=255)
                            tGCCGTTGCGGTTCACCACCTGGGGTCGGGATTTCAGTCTCCCGCCATCTCGCCAGCTGTAGCGAATGGCGCCCTGCTGATCGGCGTTGCCGATCGGCTCCAGTACGTAGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGc                                                                                                                      >  4:160367/1‑149 (MQ=255)
                                    cGGTTCTGCACCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCACCA‑‑TCGGCCCGGACGACGTGGAgcagcacaacgtactgga                                                                                                              >  4:265776‑M2/1‑131 (MQ=255)
                                     ggTTCAGCACCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAg                                                                                                             >  7:291302/1‑149 (MQ=255)
                                           gCACCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGtcgtcg                                                                                                      >  6:310405/1‑149 (MQ=255)
                                             aCCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCaccatcggcccggacgacgtggagcagcacaa                                                                                                                         >  3:134292‑M1/1‑99 (MQ=255)
                                             aCCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCaccatcggcccggacgacgtggagcagcacaa                                                                                                                         <  4:134292‑M1/131‑33 (MQ=255)
                                                       gggATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGttttt                                                                                          >  3:238529/1‑149 (MQ=255)
                                                        ggATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGcc                                                                                                                 <  4:287116/126‑1 (MQ=255)
                                                        ggATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGcc                                                                                                                 >  3:287116/1‑126 (MQ=255)
                                                              cAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTAcc                                                                                    <  5:310405/148‑1 (MQ=255)
                                                               aGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAg                                                                                  >  2:71993/1‑149 (MQ=255)
                                                                gTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCg                                                                                                                                            <  7:216308/93‑1 (MQ=255)
                                                                gTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCg                                                                                                                                            >  8:216308/1‑93 (MQ=255)
                                                                gTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAgg                                                                                 <  4:238529/149‑1 (MQ=255)
                                                                     ccGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTa                                                                                                    <  2:65451/125‑1 (MQ=255)
                                                                     ccGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTa                                                                                                    >  1:65451/1‑125 (MQ=255)
                                                                     ccGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAg                                                                            >  8:24857/1‑149 (MQ=255)
                                                                             tcGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTActgct                                                                    >  4:187717/1‑149 (MQ=255)
                                                                                    cTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGCTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCtt                                                              <  1:71993/149‑1 (MQ=255)
                                                                                    cTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGtcgtcg                                                                                                      >  7:302814/1‑108 (MQ=255)
                                                                                    cTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGtcgtcg                                                                                                      <  8:302814/108‑1 (MQ=255)
                                                                                     tGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTg                                                             >  8:213247/1‑148 (MQ=255)
                                                                                       tAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGc                                                            <  7:213247/147‑1 (MQ=255)
                                                                                         gCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGc                                                         >  7:86863/1‑148 (MQ=255)
                                                                                         gCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGc                                                         <  8:86863/148‑1 (MQ=255)
                                                                                          cGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGc                                                         >  7:304254/1‑147 (MQ=255)
                                                                                            aaTGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGt                                                     <  7:232148/149‑1 (MQ=255)
                                                                                                  gcCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCg                                                   <  7:208636/145‑1 (MQ=255)
                                                                                                  gcCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCg                                                   >  8:208636/1‑145 (MQ=255)
                                                                                                       cccgATCGGCAACGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGc                                                            <  1:299194/128‑1 (MQ=255)
                                                                                                       cccgATCGGCAACGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGc                                                            >  2:299194/4‑131 (MQ=255)
                                                                                                        gTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAg                                                                                                             <  6:58325/82‑1 (MQ=255)
                                                                                                        gTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAg                                                                                                             >  5:58325/1‑82 (MQ=255)
                                                                                                         tGATCGGGGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACGGCGTTTTTGTTACGAGGTGCAGGTACTGCCGGGCTTGCAGCCAGTCGGTAACGCtctc                                        <  2:155575/149‑1 (MQ=255)
                                                                                                          gATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCGGTAACGCTCTcc                                       >  6:259586/1‑149 (MQ=255)
                                                                                                          gATCGGCAACGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCggg                                                                                                                                          >  7:198649/1‑53 (MQ=255)
                                                                                                          gATCGGCAACGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCggg                                                                                                                                          <  8:198649/53‑1 (MQ=255)
                                                                                                            tCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACATCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCGGTAACGCTCTCCTg                                     >  5:178262/1‑149 (MQ=255)
                                                                                                               gCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCGGTAACGCTCTCCTGTAt                                  >  5:131112/1‑149 (MQ=255)
                                                                                                                 gTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCGGTAACGCTCTCCTGTATcc                                <  8:291302/149‑1 (MQ=255)
                                                                                                                    gCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCGGTAACGCTCTCCTGTATCCGGt                             >  5:75203/1‑149 (MQ=255)
                                                                                                                      cGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCGGTAACGCTCTCCTGTATCCGGTTg                           <  2:133772/149‑1 (MQ=255)
                                                                                                                        agcGGGTCCAGTAGGTTGTGGTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTTGCCCCATTGTTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTTGGCTTGCAGCCAGTCGGTAACGCTCTCCTGTATCCGGTTGcc                         <  7:210727/147‑1 (MQ=255)
                                                                                                                         tCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCGGTAACGCTCTCCTGTATCCGGTTGCCg                        >  7:277971/1‑149 (MQ=255)
                                                                                                                             gTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCGGTAACGCTCTCCTGTATCCGGTTGCCGTACg                    >  7:18501/1‑149 (MQ=255)
                                                                                                                              tCCAGTACGTTGTGCTGCtccacgtcgtccgggccgatggtgcagcacaacgtactggacccgatcggcaacgccgatcaccagggcgccattcgctacagctggcgagaaggcgggagactgaaatcccgaccccaggtgcagaaccg                      >  4:265776‑M1/1‑18 (MQ=255)
                                                                                                                                      gTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTgcagcacaacgtactggacccgatcggcaacgccgatcaccagggcgccattcgctacagctggcgagaaggcgggagactgaaatcccgaccccaggtgcagaaccgcaacggca            <  1:179656‑M2/149‑117 (MQ=255)
                                                                                                                                      gTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCGGTAACGCTCTCCTGTATCCGGTTGCCGTACGCATCGTACt           <  2:7456/149‑1 (MQ=255)
                                                                                                                                       ttGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTgcagcacaacgtactggacccgatcggcaacgccgatcaccagggcgccattcgctacagctggcgagaaggcgggagactgaaatcccgaccccaggt                             >  3:134292‑M2/1‑32 (MQ=255)
                                                                                                                                       ttGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTgcagcacaacgtactggacccgatcggcaacgccgatcaccagggcgccattcgctacagctggcgagaaggcgggagactgaaatcccgaccccaggt                             <  4:134292‑M2/131‑100 (MQ=255)
                                                                                                                                           gctgctCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACAGAGTTTTTGTTACAAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCGGTAACGCTCTCCTGTATCCGGTTGCCGTACGCATCGTACTGGATg      >  3:170968/1‑149 (MQ=255)
                                                                                                                                            ctgctCCACATCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCGGTAACGCTCTCCTGTATCCGGTTGCCGTACGCATCGTACTGGATg      <  6:178262/148‑1 (MQ=255)
                                                                                                                                              gcaccatcggcgcggacgacgtggagcagcacaacgtactggacccgatcggcaacgccgatcaccagggcgccattcgctacagctggcgagaaggcgggagactgaaatcccgaccccaggtgcagaaccgcaacggcatgaccgtc      >  6:300346‑M1/1‑2 (MQ=255)
                                                                                                                                               ctCGACGTCGTACGGGCCGA‑‑TTGTGCAGCTTTGCTCGCCCGAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGTTGGGCTTGCAGCCAGTCGGTAACGCTCTCCTGTATCCGGTTGCCGTACGCATCGTACTGGATGGCCa  <  3:160367/149‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                       
CGTGCCTGGCGGGTGGATCGGACGTTCATGCCGTTGCGGTTCTGCACCTGGGGTCGGGATTTCAGTCTCCCGCCTTCTCGCCAGCTGTAGCGAATGGCGCCCTGGTGATCGGCGTTGCCGATCGGGTCCAGTACGTTGTGCTGCTCCACGTCGTCCGGGCCGA‑‑TGGTGCAGCATTGCTCGCCCCAGTCGTCGTACCGCGTTTTTGTTACCAGGTGCAGGTACTGCTGGGCTTGCAGCCAGTCGGTAACGCTCTCCTGTATCCGGTTGCCGTACGCATCGTACTGGATGGCCA  >  NC_002947/2111920‑2112211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.