New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 256861949 (0.970)4 (0.080) 4/246 NT 7.7% coding (929/1050 nt) PP_2252 hypothetical protein
?NC_002947 = 2568630 49 (1.020)coding (918/1050 nt) PP_2252 hypothetical protein

TGCGAAAACGCCGGCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATC  >  NC_002947/2568472‑2568765
                                                                                                                                                   |                                                                                                                                                  
tGCGAAAACGCCGGCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAt                                                                                                                                                   >  8:242544/1‑149 (MQ=255)
tGCGAAAACGCCGGCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAt                                                                                                                                                   >  6:209056/1‑149 (MQ=255)
       aCGCCGGCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCg                                                                                                                                            <  2:55754/149‑1 (MQ=255)
             gCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCACGGCCCCGCTCtgg                                                                                                                                      <  6:140456‑M2/149‑4 (MQ=255)
               acaGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCtggcg                                                                                                                                    >  5:209056‑M2/1‑144 (MQ=255)
                   gccgccACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCt                                                                                                                                        >  6:102994‑M2/1‑140 (MQ=255)
                   gccgccACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCt                                                                                                                                        <  5:102994‑M2/141‑2 (MQ=255)
                   gccgccACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTtc                                                                                                                                <  2:58005/149‑1 (MQ=255)
                      gccACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCACGGCCCCGCTCTGGCGGTTCTcc                                                                                                                             <  5:140456/149‑1 (MQ=255)
                              ggTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTc                                                                                                                     <  6:280491/149‑1 (MQ=255)
                                tGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCt                                                                                                                   <  8:98533/149‑1 (MQ=255)
                                    aGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCa                                                                                                               >  2:305455/1‑149 (MQ=255)
                                      gCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCAtt                                                                                                             <  1:155441/149‑1 (MQ=255)
                                          aTGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTg                                                                                                         <  7:130109/149‑1 (MQ=255)
                                             aTCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGt                                                                                                       <  3:128844/148‑1 (MQ=255)
                                             aTCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGt                                                                                                       <  7:90480/148‑1 (MQ=255)
                                              tCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGt                                                                                                       >  7:20209/1‑147 (MQ=255)
                                              tCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGt                                                                                                       <  8:20209/147‑1 (MQ=255)
                                                                 ctCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAg                                                                                       >  3:225937/1‑144 (MQ=255)
                                                                 ctCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAg                                                                                       <  4:225937/144‑1 (MQ=255)
                                                                 ctCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCa                                                                                  >  8:31407/1‑149 (MQ=255)
                                                                    gACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCAccc                                                                               >  1:75352/1‑149 (MQ=255)
                                                                        tgctgcTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAg                                                                           >  6:166064/1‑149 (MQ=255)
                                                                         gctgctCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCtggcg                                                                                                                                    <  1:159514‑M2/91‑6 (MQ=255)
                                                                         gctgctCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCtggcg                                                                                                                                    >  2:159514‑M2/1‑86 (MQ=255)
                                                                          ctgctCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAgtt                                                                         <  7:242544/149‑1 (MQ=255)
                                                                            gctCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAgagcggggccatggcggg                                                                                                                                  <  7:30058‑M1/90‑19 (MQ=255)
                                                                            gctCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAgagcggggccatggcggg                                                                                                                                  >  8:30058‑M1/1‑72 (MQ=255)
                                                                                cACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGc                                                                                                >  8:226041/1‑120 (MQ=255)
                                                                                cACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGc                                                                                                <  7:226041/120‑1 (MQ=255)
                                                                                cACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGa                                                                   <  5:166064/149‑1 (MQ=255)
                                                                                   cGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCa                                                                >  5:324112/1‑149 (MQ=255)
                                                                                             gcACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGggtg                                                      <  2:75352/149‑1 (MQ=255)
                                                                                              cACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGggtgg                                                     <  8:83761/149‑1 (MQ=255)
                                                                                                     cAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAgagcggggccatggcggggg                                                                                                                                <  1:248526‑M1/67‑21 (MQ=255)
                                                                                                     cAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCAgagcggggccatggcggggg                                                                                                                                >  2:248526‑M1/1‑47 (MQ=255)
                                                                                                      aGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGt                                              >  2:181609/1‑148 (MQ=255)
                                                                                                       gCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGCCCCCCGCAATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAAAGCCACCTTCAGGAACACCAGCAGTTGTTCGACCATCTGCGGGTCGTCACGGTCa                                            >  6:203547/1‑149 (MQ=255)
                                                                                                           gCTGTCCTCAACCTGCCCCGACAGGTAATAGTCCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATggg                                        <  7:268035/149‑1 (MQ=255)
                                                                                                              gTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGtca                                     >  1:299204/1‑149 (MQ=255)
                                                                                                              gTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGtca                                     >  4:226594/1‑149 (MQ=255)
                                                                                                               tCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGtcat                                    >  7:191357/1‑149 (MQ=255)
                                                                                                               tCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGtcat                                    <  1:181609/149‑1 (MQ=255)
                                                                                                                 cTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAgg                                                                                      >  3:24506/1‑97 (MQ=255)
                                                                                                                 cTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAgg                                                                                      <  4:24506/97‑1 (MQ=255)
                                                                                                                 cTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGtcatc                                   <  3:101399/148‑1 (MQ=255)
                                                                                                                 cTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGATGGTCGAACAACTGCGggt                                                       <  2:50315/128‑1 (MQ=255)
                                                                                                                 cTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGATGGTCGAACAACTGCGggt                                                       >  1:50315/1‑128 (MQ=255)
                                                                                                                  tCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAg                                                                           >  8:19988/1‑107 (MQ=255)
                                                                                                                  tCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAg                                                                           <  7:19988/107‑1 (MQ=255)
                                                                                                                    aaCCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCggg                                                        <  4:149525/124‑1 (MQ=255)
                                                                                                                    aaCCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCggg                                                        >  3:149525/1‑124 (MQ=255)
                                                                                                                    aaCCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCAcc                                <  6:324112/148‑1 (MQ=255)
                                                                                                                    aaCCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCAcc                                <  8:143476/148‑1 (MQ=255)
                                                                                                                            ccGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCg                       >  6:82368/1‑149 (MQ=255)
                                                                                                                             cGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCgg                      <  3:226594/149‑1 (MQ=255)
                                                                                                                                   gTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCgg                >  7:230888/1‑149 (MQ=255)
                                                                                                                                   gTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCgg                <  8:191357/149‑1 (MQ=255)
                                                                                                                                    tAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCg                                                                    <  6:266407/96‑1 (MQ=255)
                                                                                                                                    tAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCg                                                                    >  5:266407/1‑96 (MQ=255)
                                                                                                                                          aCCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCg          >  2:100449/1‑148 (MQ=255)
                                                                                                                                           cccccGCCATGGCCCCGCTCtggcgggggtctattacctgtcggggcaggttgaggacagcttgctg                                                                                          <  1:248526‑M2/67‑48 (MQ=255)
                                                                                                                                           cccccGCCATGGCCCCGCTCtggcgggggtctattacctgtcggggcaggttgaggacagcttgctg                                                                                          >  2:248526‑M2/1‑20 (MQ=255)
                                                                                                                                             cccGCCATGGCCCCGCTCtggcgggggtctattacctgtcggggcaggttgaggacagcttgctggccagtgcgccgcggccggtggagc                                                                 >  8:30058‑M2/1‑18 (MQ=255)
                                                                                                                                             cccGCCATGGCCCCGCTCtggcgggggtctattacctgtcggggcaggttgaggacagcttgctggccagtgcgccgcggccggtggagc                                                                 <  7:30058‑M2/90‑73 (MQ=255)
                                                                                                                                               cGCCAgagcggggccatggcgggggtctattacctgtcggggcaggttgaggacagcttgctggccagtgcgccgcggccggtggagcagcaggtcgagcagcagcaggcgcctttgatcattcgcctgccaccttagtggcggcctgt    >  5:209056‑M1/1‑5 (MQ=255)
                                                                                                                                               cGCCAgagcggggccatggcgggggtctattacctgtcggggcaggttgaggacagcttgctggccagtgcgccgcggccggtggagcagc                                                              <  1:159514‑M1/91‑87 (MQ=255)
                                                                                                                                               cGCCAgagcggggccatggcgggggtctattacctgtcggggcaggttgaggacagcttgctggccagtgcgccgcggccggtggagcagc                                                              >  2:159514‑M1/1‑5 (MQ=255)
                                                                                                                                                 ccAgagcggggccgtggcgggggtctattacctgtcggggcaggttgaggacagcttgctggccagtgcgccgcggccggtggagcagcaggtcgagcagcagcaggcgcctttgatcattcgcctgccaccttagtggcggcctgtgc  <  6:140456‑M1/149‑147 (MQ=255)
                                                                                                                                                   agagcggggccatggcgggggtctattacctgtcggggcaggttgaggacagcttgctggccagtgcgccgcggccggtggagcagcaggtcgagcagcagcaggcgcctttgatcattcgcctgccaccttagtggcggc        >  6:102994‑M1/1‑1 (MQ=255)
                                                                                                                                                   agagcggggccatggcgggggtctattacctgtcggggcaggttgaggacagcttgctggccagtgcgccgcggccggtggagcagcaggtcgagcagcagcaggcgcctttgatcattcgcctgccaccttagtggcggc        <  5:102994‑M1/141‑141 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
TGCGAAAACGCCGGCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATC  >  NC_002947/2568472‑2568765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.