New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2568619	49 (0.970)	4 (0.080)	4/246	NT	7.7%	coding (929/1050 nt)	PP_2252	hypothetical protein
	?	NC_002947	= 2568630	49 (1.020)					coding (918/1050 nt)	PP_2252	hypothetical protein

GCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCT  >  NC_002947/2568485‑2568771                                                                                                                                                  |                                                                                                                                              gCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCACGGCCCCGCTCtgg                                                                                                                                            <  6:140456‑M2/149‑4 (MQ=255)   acaGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCtggcg                                                                                                                                          >  5:209056‑M2/1‑144 (MQ=255)       gccgccACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCt                                                                                                                                              <  5:102994‑M2/141‑2 (MQ=255)       gccgccACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCt                                                                                                                                              >  6:102994‑M2/1‑140 (MQ=255)       gccgccACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTtc                                                                                                                                      <  2:58005/149‑1 (MQ=255)          gccACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCACGGCCCCGCTCTGGCGGTTCTcc                                                                                                                                   <  5:140456/149‑1 (MQ=255)                  ggTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTc                                                                                                                           <  6:280491/149‑1 (MQ=255)                    tGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCt                                                                                                                         <  8:98533/149‑1 (MQ=255)                        aGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCa                                                                                                                     >  2:305455/1‑149 (MQ=255)                          gCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCAtt                                                                                                                   <  1:155441/149‑1 (MQ=255)                              aTGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTg                                                                                                               <  7:130109/149‑1 (MQ=255)                                 aTCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGt                                                                                                             <  7:90480/148‑1 (MQ=255)                                 aTCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGt                                                                                                             <  3:128844/148‑1 (MQ=255)                                  tCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGt                                                                                                             >  7:20209/1‑147 (MQ=255)                                  tCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGt                                                                                                             <  8:20209/147‑1 (MQ=255)                                                     ctCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAg                                                                                             <  4:225937/144‑1 (MQ=255)                                                     ctCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAg                                                                                             >  3:225937/1‑144 (MQ=255)                                                     ctCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCa                                                                                        >  8:31407/1‑149 (MQ=255)                                                        gACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCAccc                                                                                     >  1:75352/1‑149 (MQ=255)                                                            tgctgcTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAg                                                                                 >  6:166064/1‑149 (MQ=255)                                                             gctgctCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCtggcg                                                                                                                                          <  1:159514‑M2/91‑6 (MQ=255)                                                             gctgctCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCtggcg                                                                                                                                          >  2:159514‑M2/1‑86 (MQ=255)                                                              ctgctCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAgtt                                                                               <  7:242544/149‑1 (MQ=255)                                                                    cACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGc                                                                                                      >  8:226041/1‑120 (MQ=255)                                                                    cACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGc                                                                                                      <  7:226041/120‑1 (MQ=255)                                                                    cACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGa                                                                         <  5:166064/149‑1 (MQ=255)                                                                       cGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCa                                                                      >  5:324112/1‑149 (MQ=255)                                                                                 gcACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGggtg                                                            <  2:75352/149‑1 (MQ=255)                                                                                  cACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGggtgg                                                           <  8:83761/149‑1 (MQ=255)                                                                                          aGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGt                                                    >  2:181609/1‑148 (MQ=255)                                                                                           gCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGCCCCCCGCAATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAAAGCCACCTTCAGGAACACCAGCAGTTGTTCGACCATCTGCGGGTCGTCACGGTCa                                                  >  6:203547/1‑149 (MQ=255)                                                                                               gCTGTCCTCAACCTGCCCCGACAGGTAATAGTCCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATggg                                              <  7:268035/149‑1 (MQ=255)                                                                                                  gTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGtca                                           >  4:226594/1‑149 (MQ=255)                                                                                                  gTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGtca                                           >  1:299204/1‑149 (MQ=255)                                                                                                   tCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGtcat                                          <  1:181609/149‑1 (MQ=255)                                                                                                   tCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGtcat                                          >  7:191357/1‑149 (MQ=255)                                                                                                     cTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAgg                                                                                            >  3:24506/1‑97 (MQ=255)                                                                                                     cTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAgg                                                                                            <  4:24506/97‑1 (MQ=255)                                                                                                     cTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGtcatc                                         <  3:101399/148‑1 (MQ=255)                                                                                                     cTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGATGGTCGAACAACTGCGggt                                                             <  2:50315/128‑1 (MQ=255)                                                                                                     cTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGATGGTCGAACAACTGCGggt                                                             >  1:50315/1‑128 (MQ=255)                                                                                                      tCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAg                                                                                 <  7:19988/107‑1 (MQ=255)                                                                                                      tCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAg                                                                                 >  8:19988/1‑107 (MQ=255)                                                                                                        aaCCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCggg                                                              <  4:149525/124‑1 (MQ=255)                                                                                                        aaCCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCggg                                                              >  3:149525/1‑124 (MQ=255)                                                                                                        aaCCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCAcc                                      <  6:324112/148‑1 (MQ=255)                                                                                                        aaCCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCAcc                                      <  8:143476/148‑1 (MQ=255)                                                                                                                ccGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCg                             >  6:82368/1‑149 (MQ=255)                                                                                                                 cGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCgg                            <  3:226594/149‑1 (MQ=255)                                                                                                                       gTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCgg                      >  7:230888/1‑149 (MQ=255)                                                                                                                       gTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCgg                      <  8:191357/149‑1 (MQ=255)                                                                                                                        tAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCg                                                                          >  5:266407/1‑96 (MQ=255)                                                                                                                        tAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCg                                                                          <  6:266407/96‑1 (MQ=255)                                                                                                                              aCCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCg                >  2:100449/1‑148 (MQ=255)                                                                                                                               cccccGCCATGGCCCCGCTCtggcgggggtctattacctgtcggggcaggttgaggacagcttgctg                                                                                                <  1:248526‑M2/67‑48 (MQ=255)                                                                                                                               cccccGCCATGGCCCCGCTCtggcgggggtctattacctgtcggggcaggttgaggacagcttgctg                                                                                                >  2:248526‑M2/1‑20 (MQ=255)                                                                                                                                 cccGCCATGGCCCCGCTCtggcgggggtctattacctgtcggggcaggttgaggacagcttgctggccagtgcgccgcggccggtggagc                                                                       >  8:30058‑M2/1‑18 (MQ=255)                                                                                                                                 cccGCCATGGCCCCGCTCtggcgggggtctattacctgtcggggcaggttgaggacagcttgctggccagtgcgccgcggccggtggagc                                                                       <  7:30058‑M2/90‑73 (MQ=255)                                                                                                                                           ccccGCTCTGGCTGTTCTGCATCAACTCCTGCCATTCCTGGTTCAACGTCACGTTCAGGATCAGCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCt  <  5:203547/149‑1 (MQ=255)                                                                                                                                           ccccGCTCTGGCGGTTCTCCATCAACTCCTGCCATACCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGGTGAGGCAATCGAAATCATCGCCCCt  >  5:317632/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                              GCACAGGCCGCCACTAAGGTGGCAGGCGAATGATCAAAGGCGCCTGCTGCTGCTCGACCTGCTGCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAACTCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCT  >  NC_002947/2568485‑2568771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.