New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2871438	30 (0.600)	3 (0.060)	3/244	NT	10.1%	coding (216/657 nt)	PP_2524	HD domain‑containing protein
	?	NC_002947	= 2871463	25 (0.520)					coding (241/657 nt)	PP_2524	HD domain‑containing protein

ATGATGGCTCCCACGACTTGGCCCATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAG  >  NC_002947/2871296‑2871585                                                                                                                                               |                                                                                                                                                    atgctgGCTGCCACGTCTTGGCCCATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGt                                                                                                                                               <  2:186951/149‑1 (MQ=255)      ggCTCCCACGACTTGGCCCATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTggg                                                                                                                                            >  5:302403/1‑147 (MQ=255)       gCTCCCACGACTTGGCCCATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCa                                                                                                                                          <  3:199891/148‑1 (MQ=255)           ccACGACTTGGCCCATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCt                                                                                                                                     <  7:155172/149‑1 (MQ=255)            cACGACTTGGCCCATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTc                                                                                                                                    >  3:205961/1‑149 (MQ=255)             aCGACTTGGCCCATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCg                                                                                                                                   <  5:2374/149‑1 (MQ=255)                    ggCCCATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGtt                                                                                                                              <  6:220717/147‑1 (MQ=255)                    ggCCCATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGt                                                                                                                            >  7:28391/1‑149 (MQ=255)                      cccATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTcg                                                                                                                          >  6:302403‑M2/1‑147 (MQ=255)                       ccATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTcgg                                                                                                                         <  8:146191‑M2/149‑4 (MQ=255)                        cATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAgg                                                                                                                                        <  2:53782/133‑1 (MQ=255)                        cATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAgg                                                                                                                                        >  1:53782/1‑133 (MQ=255)                               aTCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGacaacgtcgaggcctgcccacgtaacggcgaatgc                                                                                                                  <  5:129610‑M1/148‑36 (MQ=255)                               aTCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAg                                                                                                                                         >  3:44297/1‑125 (MQ=255)                               aTCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAg                                                                                                                                         <  4:44297/125‑1 (MQ=255)                                 cGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGc                                                                                                               >  5:58910/1‑149 (MQ=255)                                   tgtgtgGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGt                                                                                                                                               >  3:268996/1‑115 (MQ=255)                                   tgtgtgGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGt                                                                                                                                               <  4:268996/115‑1 (MQ=255)                                                  gcACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGacaacgtcgaggcctgcccacgtaacggcgaatgcttt                                                                                                               >  2:283782‑M1/1‑94 (MQ=255)                                                  gcACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGacaacgtcgaggcctgcccacgtaacggcgaatgcttt                                                                                                               <  1:283782‑M1/132‑39 (MQ=255)                                                          tCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATggtc                                                                                      >  8:297495/1‑147 (MQ=255)                                                                      aGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTggg                                                                          <  6:93686/149‑1 (MQ=255)                                                                       gggTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGc                                                                         >  5:133986/1‑149 (MQ=255)                                                                              gACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGa                                                                  <  7:173202/149‑1 (MQ=255)                                                                                 cTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAg                                                                 >  7:189122/1‑147 (MQ=255)                                                                                 cTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCa                                                               <  6:133986/149‑1 (MQ=255)                                                                                      aaTCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTa                                                           <  7:146191/148‑1 (MQ=255)                                                                                       atgtttgttgcGGCGACGGTTGTTCACGACTGTGTGTCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAg                                                          <  8:207264/141‑1 (MQ=255)                                                                                            gcttgcGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGc                                                       <  6:58910/146‑1 (MQ=255)                                                                                            gcttgcGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGAATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCAt                                                     <  4:205961/148‑1 (MQ=255)                                                                                                gcggcgACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGa                                                 <  8:189122/148‑1 (MQ=255)                                                                                                          tgctgcACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAacaca                                       >  6:148622/1‑148 (MQ=255)                                                                                                             tgcACGACTGTGTGGCGGTGGGAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGt                                   >  6:232604/1‑149 (MQ=255)                                                                                                                                   aaaGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTcggcgaatgcttttccaccgccacacagtcgtgcagcaccgtcgccgcaagcaagatttcaaggtcgccaccctccacccgctggatccggtgc                              >  2:283782‑M2/1‑38 (MQ=255)                                                                                                                                   aaaGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTcggcgaatgcttttccaccgccacacagtcgtgcagcaccgtcgccgcaagcaagatttcaaggtcgccaccctccacccgctggatccggtgc                              <  1:283782‑M2/132‑95 (MQ=255)                                                                                                                                    aaGCATTCGCCGTTACGTGGGCAGGCCTCTACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCt            >  5:144605/1‑149 (MQ=255)                                                                                                                                      gCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTcggcgaatgcttttccaccgccacacagtcgtgcagcaccgtcgccgcaagcaagatttcaaggtcgccaccctccacccgctggatccggtgcgcattgacccacacacgat           <  5:129610‑M2/148‑114 (MQ=255)                                                                                                                                         ttCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGacac       >  3:305072/1‑149 (MQ=255)                                                                                                                                             ccGacaacgtcgaggcctgcccacgtaacggcgaatgcttttccaccgccacacagtcgtgcagcaccgtcgccgcaagcaagatttcaaggtcgccaccctccacccgctggatccggtgcgcattgacccacacacgatgaatatgg   <  8:146191‑M1/149‑147 (MQ=255)                                                                                                                                              cGacaacgtcgaggcctgcccacgtaacggcgaatgcttttccaccgccacacagtcgtgcagcaccgtcgccgcaagcaagatttcaaggtcgccaccctccacccgctggatccggtgcgcattgacccacacacgatgaatatggg  >  6:302403‑M1/1‑2 (MQ=255)                                                                                                                                               |                                                                                                                                                    ATGATGGCTCCCACGACTTGGCCCATATTCATCGTGTGTGGGTCAATGCGCACCGGATCCAGCGGGTGGAGGGTGGCGACCTTGAAATCTTGCTTGCGGCGACGGTGCTGCACGACTGTGTGGCGGTGGAAAAGCATTCGCCGTTACGTGGGCAGGCCTCGACGTTGTCGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAG  >  NC_002947/2871296‑2871585

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.