New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3577425 =	20 (0.400)	3 (0.070)	3/230	NT	11.4%	intergenic (+19/‑161)	PP_3157/PP_3158	inositol monophosphatase family protein/hypothetical protein
	?	NC_002947	3577480 =	29 (0.650)					intergenic (+74/‑106)	PP_3157/PP_3158	inositol monophosphatase family protein/hypothetical protein

CGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGACTCCCGGCGCAGCCGCC  >  NC_002947/3577280‑3577572                                                                                                                                                  |                                                                                                                                                    gcgggggaggaaattcgcgtagcttgcaaccatcggcaccgggtcgatattgggcggctgcgccgggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGcc                                                                                                                                                  >  6:289547‑M1/146‑149 (MQ=255) gcgggggaggaaattcgcgtagcttgcaaccatcggcaccgggtcgatattgggcggctgcgccgggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGcc                                                                                                                                                  <  1:9566‑M1/4‑1 (MQ=255)   gggggaggaaattcgcgtagcttgcaaccatcggcaccgggtcgatattgggcggctgcgccgggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCctc                                                                                                                                                >  3:24725‑M1/144‑149 (MQ=255)          gaaattcgcgtagcttgcaaccatcggcaccgggtcgatattgggcggctgcgccgggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCgg                                                                                                                                         >  5:251390‑M1/137‑149 (MQ=255)                cGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTGCTTCGCTCCTGGCCTCTTCGCGGGCGAGt                                                                                                                                   <  2:305741/149‑1 (MQ=255)                              gggATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTgggt                                                                                                                     >  7:115239/1‑148 (MQ=255)                                               atattgggcggctgcgccgggagtcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAag                                                                                                    >  1:142879‑M1/100‑149 (MQ=255)                                                        gggTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCca                                                                                           >  6:268213/1‑149 (MQ=255)                                                               tggtggCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGttt                                                                                    <  1:52048/149‑1 (MQ=255)                                                                 gtggCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTg                                                                                                                                                     >  6:77680/1‑82 (MQ=255)                                                                 gtggCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTg                                                                                                                                                     <  5:77680/82‑1 (MQ=255)                                                                      tcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAaga                                                                                                   <  7:139584‑M1/51‑1 (MQ=255)                                                                      tcagcgcggcctggccaagcatagagcccgaaaatgggaaaaagtgcggtggctggagagaatgcaaacctgtggcGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAaga                                                                                                   >  8:139584‑M1/77‑127 (MQ=255)                                                                              aCCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCTAAGAGGCCGCCACAGGTTTGc                                                                                  <  1:298892/136‑1 (MQ=255)                                                                              aCCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGc                                                                                  >  2:298892/1‑136 (MQ=255)                                                                                ccTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCAc                                                                   >  6:49849/1‑149 (MQ=255)                                                                                            gcgcAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTACTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTcc                                                       >  1:102877/1‑149 (MQ=255)                                                                                                          gaggtggcgcCAGGCAATTGGACCGGGGTTCTTCGCGCGTGGCCTCTGCGCGGGCCAGTCCCTGCTTGGGCGCGCGGGTTACCCGCTAACTGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGctct                                         <  8:115239/143‑1 (MQ=255)                                                                                                                  gccacgccaTGTGATGCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTgg                                 >  7:77457/1‑149 (MQ=255)                                                                                                                       gccaTGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGc                                                                                  <  8:2656/95‑1 (MQ=255)                                                                                                                       gccaTGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGc                                                                                  >  7:2656/1‑95 (MQ=255)                                                                                                                          aTGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCcg                         >  2:9566/1‑149 (MQ=255)                                                                                                                              gATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCgcgc                      <  5:268213/148‑1 (MQ=255)                                                                                                                               aTCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTg                    >  3:253821/1‑149 (MQ=255)                                                                                                                                 ccGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGa                   >  3:285748/1‑148 (MQ=255)                                                                                                                                  cGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGACt                 >  8:20863/1‑149 (MQ=255)                                                                                                                                   gggTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGACTc                >  1:121488/1‑149 (MQ=255)                                                                                                                                         ttcGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGa                   >  2:22737/1‑140 (MQ=255)                                                                                                                                         ttcGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGa                   <  1:22737/140‑1 (MQ=255)                                                                                                                                                 tGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGACTCCCGGCGCAgccgcc  >  8:222585/1‑149 (MQ=255)                                                                                                                                                  GGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGACTCCCGGCGCAgccgcc  <  7:109277‑M1/148‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCATGCGCAGGTGCTGGAGATGTTGCGCCACGCCATGTGATCCGGGTTCTTCGCTCCTGGCCTCTTCGCGGGCGAGTCCCTTCTTGTGGGAGCGGGTTACCCGCGAAGAGGCCGCCACAGGTTTGCATTCTCTCCAGCCACCGCACTTTTTCCCATTTTCGGGCTCTATGCTTGGCCAGGCCGCGCTGACTCCCGGCGCAGCCGCC  >  NC_002947/3577280‑3577572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.