New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 476855940 (0.790)5 (0.100) 5/246 NT 11.3% coding (253/957 nt) PP_4218 lipase/esterase family protein
?NC_002947 = 4768582 40 (0.830)coding (230/957 nt) PP_4218 lipase/esterase family protein

GGGAAACGCCACTGCGGCGCCAGCCGGTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGAGGACTCTTCGAACTGGCGG  >  NC_002947/4768417‑4768707
                                                                                                                                              |                                                                                                                                                    
gggAAACGCCACTGCGGCGCCAGCCGGTTGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGc                                                                                                                                                >  1:182548/1‑149 (MQ=255)
        ccACTGCGGCGCCAGCCGGTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAg                                                                                                                                        >  3:314354/1‑149 (MQ=255)
               ggcgCCAGCCGGTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACCGCCCGCCGCaggccgaccctgcactggccgg                                                                                                                                >  2:133681‑M1/1‑127 (MQ=255)
                  gCCAGCCGGTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCTTGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTg                                                                                                                              >  6:236797‑M2/1‑148 (MQ=255)
                   ccAGCCGGTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTgc                                                                                                                             >  4:314354‑M2/1‑147 (MQ=255)
                    cAGCCGGTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTgcg                                                                                                                            <  5:69720‑M2/149‑4 (MQ=255)
                        cGGTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCaggccgaccctgcactggccggcgcggcgc                                                                                                                        <  1:250913‑M1/149‑31 (MQ=255)
                         ggTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCggcggg                                                                                                                       <  7:13548/149‑1 (MQ=255)
                         ggTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATCCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCggcggg                                                                                                                       >  3:96794/1‑149 (MQ=255)
                           tAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCggcgggcg                                                                                                                     <  5:244686/149‑1 (MQ=255)
                             gCCCTCGGCAATCTGCGGCACCCCGGCATCCTGCGCCAGGTTCCTGCAGAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCTCCGCCATGCATGTACAGCAGCGCCGCGGCGGGCAGTGCAGGGTCGGCCTGCGGCGGGCTGt                                                                                                                   <  4:96794/149‑1 (MQ=255)
                             gCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGGCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGt                                                                                                                   <  2:187158/149‑1 (MQ=255)
                              cccACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTa                                                                                                                  >  6:293553/1‑149 (MQ=255)
                               ccACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTa                                                                                                                  >  4:6463/1‑148 (MQ=255)
                                      aaTCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACCGCCCGCCGCaggccgaccctgcactggccggcgcggcgctgctgtacctgcatg                                                                                                         <  1:133681‑M1/149‑46 (MQ=255)
                                       aTCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCAc                                                                                                         <  1:5345/149‑1 (MQ=255)
                                            cGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCaggccgaccctgcactggccggcgcgg                                                                                                                           >  4:116548‑M1/1‑99 (MQ=255)
                                            cGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCaggccgaccctgcactggccggcgcgg                                                                                                                           <  3:116548‑M1/126‑28 (MQ=255)
                                                   ccGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATg                                                                                             <  3:6463/149‑1 (MQ=255)
                                                              cgcCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCggg                                                                                  <  5:118038/149‑1 (MQ=255)
                                                                      tCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAAc                                                                          >  3:175940/1‑149 (MQ=255)
                                                                           cacaGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTc                                                                             <  3:242947/141‑1 (MQ=255)
                                                                           cacaGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTc                                                                             >  4:242947/1‑141 (MQ=255)
                                                                                        gCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGGGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAg                                                        >  7:169746/1‑149 (MQ=255)
                                                                                        gCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAg                                                        >  2:61165/1‑149 (MQ=255)
                                                                                          gAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTc                                                      >  2:206412/1‑149 (MQ=255)
                                                                                                aGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCggg                                                                                  <  8:18282/115‑1 (MQ=255)
                                                                                                aGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCggg                                                                                  >  7:18282/1‑115 (MQ=255)
                                                                                                aGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCgg                                                                                   <  4:281130/114‑1 (MQ=255)
                                                                                                aGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCgg                                                                                   <  4:285673/114‑1 (MQ=255)
                                                                                                aGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCgg                                                                                   >  3:285673/1‑114 (MQ=255)
                                                                                                aGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCgg                                                                                   >  3:281130/1‑114 (MQ=255)
                                                                                                    tGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCtcgtcg                                            <  1:206412/149‑1 (MQ=255)
                                                                                                           cacGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGATAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGc                                     >  6:246510/1‑149 (MQ=255)
                                                                                                               tAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGc                                 <  4:175940/149‑1 (MQ=255)
                                                                                                                  ccgccgccATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGGCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAAt                              <  3:45131/149‑1 (MQ=255)
                                                                                                                        ccATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGt                                                                   <  7:293973/106‑1 (MQ=255)
                                                                                                                        ccATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGt                                                                   >  8:293973/1‑106 (MQ=255)
                                                                                                                        ccATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAgcgc                        <  8:169746/149‑1 (MQ=255)
                                                                                                                        ccATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAgcgc                        >  3:158637/1‑149 (MQ=255)
                                                                                                                         cATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTgcggcgggcggtacctgcatggcggcggctacgtggtgggcagcctcgattcgcatgacacgctgtgctggaacctggcgcaggatgccggggtgccggtgatt                       <  1:133681‑M2/149‑105 (MQ=255)
                                                                                                                           tGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGa                     <  6:69720/149‑1 (MQ=255)
                                                                                                                             cAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGAg                    <  5:293553/148‑1 (MQ=255)
                                                                                                                                gTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGAGGAct                >  5:175147/1‑149 (MQ=255)
                                                                                                                                      cagcGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCg                      >  7:69099/1‑137 (MQ=255)
                                                                                                                                      cagcGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCg                      <  8:69099/137‑1 (MQ=255)
                                                                                                                                        gcgccgcgccGGCCAGTGCAGGGTCGGCCTgcggcgctgctgtacctgcatggcggcggctacgtggtgggcagcctcgattcgcatgacacgctgtgctggaacctggcgcaggatgccggggtgccggtgattgccgtgggctaccg        <  1:250913‑M2/149‑120 (MQ=255)
                                                                                                                                        gcgccgcgccGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGc                                          <  7:217626/115‑1 (MQ=255)
                                                                                                                                        gcgccgcgccGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGc                                          >  8:217626/1‑115 (MQ=255)
                                                                                                                                         cgccgcgccgGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGACCTTGCCCGCAATCAGCGCCGAGGACTCTTCGAACt       >  8:8010/1‑149 (MQ=255)
                                                                                                                                           ccgcgccgGCCAGTGCAGGGTCGGCCTgcggcgctgctgtacctgcatggcggcggctacgtggtgggcagcctcgattcgcatgacacgctgtgctggaacctggcgcaggatgccggggtgccg                            >  4:116548‑M2/1‑27 (MQ=255)
                                                                                                                                           ccgcgccgGCCAGTGCAGGGTCGGCCTgcggcgctgctgtacctgcatggcggcggctacgtggtgggcagcctcgattcgcatgacacgctgtgctggaacctggcgcaggatgccggggtgccg                            <  3:116548‑M2/126‑100 (MQ=255)
                                                                                                                                           ccgcgccgGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGAGGACTCTTCGAACTgg     <  4:158637/149‑1 (MQ=255)
                                                                                                                                            cgcgccgGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGAGGACTCTTCGAACTggc    <  2:182548/149‑1 (MQ=255)
                                                                                                                                            cgcaggccgaccctgcactggccggcgcggcgctgctgtacctgcatggcggcggctacgtggtgggcagcctcgattcgcatgacacgctgtgctggaacctggcgcaggatgccggggtgccggtgattgccgtgggctaccggctg    <  5:69720‑M1/149‑147 (MQ=255)
                                                                                                                                             gcaggccgaccctgcactggccggcgcggcgctgctgtacctgcatggcggcggctacgtggtgggcagcctcgattcgcatgacacgctgtgctggaacctggcgcaggatgccggggtgccggtgattgccgtgggctaccggctgg   >  4:314354‑M1/1‑2 (MQ=255)
                                                                                                                                              caggccgaccctgcactggccggcgcggcgctgctgtacctgcaaggcggcggctacgtggtgggcagcctcgattcgcatgacacgctgtgctggaacctggcgcaggatgccggggtgccggtgattgccgtgggctaccggctggc  >  6:236797‑M1/1‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                                    
GGGAAACGCCACTGCGGCGCCAGCCGGTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGAGGACTCTTCGAACTGGCGG  >  NC_002947/4768417‑4768707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.