New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 476855940 (0.790)5 (0.100) 5/246 NT 11.3% coding (253/957 nt) PP_4218 lipase/esterase family protein
?NC_002947 = 4768582 40 (0.830)coding (230/957 nt) PP_4218 lipase/esterase family protein

GCCAGCCGGTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGAGGACTCTTCGAACTGGCGGCGCGCCTCGTCCGCCGCCAGG  >  NC_002947/4768435‑4768728
                                                                                                                                                   |                                                                                                                                                  
gCCAGCCGGTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCTTGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTg                                                                                                                                                   >  6:236797‑M2/1‑148 (MQ=255)
 ccAGCCGGTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTgc                                                                                                                                                  >  4:314354‑M2/1‑147 (MQ=255)
  cAGCCGGTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTgcg                                                                                                                                                 <  5:69720‑M2/149‑4 (MQ=255)
       ggTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCggcggg                                                                                                                                            <  7:13548/149‑1 (MQ=255)
       ggTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATCCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCggcggg                                                                                                                                            >  3:96794/1‑149 (MQ=255)
         tAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCggcgggcg                                                                                                                                          <  5:244686/149‑1 (MQ=255)
           gCCCTCGGCAATCTGCGGCACCCCGGCATCCTGCGCCAGGTTCCTGCAGAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCTCCGCCATGCATGTACAGCAGCGCCGCGGCGGGCAGTGCAGGGTCGGCCTGCGGCGGGCTGt                                                                                                                                        <  4:96794/149‑1 (MQ=255)
           gCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGGCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGt                                                                                                                                        <  2:187158/149‑1 (MQ=255)
            cccACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTa                                                                                                                                       >  6:293553/1‑149 (MQ=255)
             ccACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTa                                                                                                                                       >  4:6463/1‑148 (MQ=255)
                     aTCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCAc                                                                                                                              <  1:5345/149‑1 (MQ=255)
                                 ccGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATg                                                                                                                  <  3:6463/149‑1 (MQ=255)
                                            cgcCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCggg                                                                                                       <  5:118038/149‑1 (MQ=255)
                                                    tCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAAc                                                                                               >  3:175940/1‑149 (MQ=255)
                                                         cacaGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTc                                                                                                  <  3:242947/141‑1 (MQ=255)
                                                         cacaGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTc                                                                                                  >  4:242947/1‑141 (MQ=255)
                                                                      gCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGGGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAg                                                                             >  7:169746/1‑149 (MQ=255)
                                                                      gCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAg                                                                             >  2:61165/1‑149 (MQ=255)
                                                                        gAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTc                                                                           >  2:206412/1‑149 (MQ=255)
                                                                              aGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCggg                                                                                                       <  8:18282/115‑1 (MQ=255)
                                                                              aGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCggg                                                                                                       >  7:18282/1‑115 (MQ=255)
                                                                              aGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCgg                                                                                                        >  3:285673/1‑114 (MQ=255)
                                                                              aGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCgg                                                                                                        >  3:281130/1‑114 (MQ=255)
                                                                              aGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCgg                                                                                                        <  4:281130/114‑1 (MQ=255)
                                                                              aGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCgg                                                                                                        <  4:285673/114‑1 (MQ=255)
                                                                                  tGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCtcgtcg                                                                 <  1:206412/149‑1 (MQ=255)
                                                                                         cacGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGATAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGc                                                          >  6:246510/1‑149 (MQ=255)
                                                                                             tAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGc                                                      <  4:175940/149‑1 (MQ=255)
                                                                                                ccgccgccATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGGCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAAt                                                   <  3:45131/149‑1 (MQ=255)
                                                                                                      ccATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGt                                                                                        <  7:293973/106‑1 (MQ=255)
                                                                                                      ccATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGt                                                                                        >  8:293973/1‑106 (MQ=255)
                                                                                                      ccATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAgcgc                                             <  8:169746/149‑1 (MQ=255)
                                                                                                      ccATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAgcgc                                             >  3:158637/1‑149 (MQ=255)
                                                                                                       cATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTgcggcgggcggtacctgcatggcggcggctacgtggtgggcagcctcgattcgcatgacacgctgtgctggaacctggcgcaggatgccggggtgccggtgatt                                            <  1:133681‑M2/149‑105 (MQ=255)
                                                                                                         tGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGa                                          <  6:69720/149‑1 (MQ=255)
                                                                                                           cAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGAg                                         <  5:293553/148‑1 (MQ=255)
                                                                                                              gTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGAGGAct                                     >  5:175147/1‑149 (MQ=255)
                                                                                                                    cagcGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCg                                           <  8:69099/137‑1 (MQ=255)
                                                                                                                    cagcGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCg                                           >  7:69099/1‑137 (MQ=255)
                                                                                                                      gcgccgcgccGGCCAGTGCAGGGTCGGCCTgcggcgctgctgtacctgcatggcggcggctacgtggtgggcagcctcgattcgcatgacacgctgtgctggaacctggcgcaggatgccggggtgccggtgattgccgtgggctaccg                             <  1:250913‑M2/149‑120 (MQ=255)
                                                                                                                      gcgccgcgccGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGc                                                               >  8:217626/1‑115 (MQ=255)
                                                                                                                      gcgccgcgccGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGc                                                               <  7:217626/115‑1 (MQ=255)
                                                                                                                       cgccgcgccgGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGACCTTGCCCGCAATCAGCGCCGAGGACTCTTCGAACt                            >  8:8010/1‑149 (MQ=255)
                                                                                                                         ccgcgccgGCCAGTGCAGGGTCGGCCTgcggcgctgctgtacctgcatggcggcggctacgtggtgggcagcctcgattcgcatgacacgctgtgctggaacctggcgcaggatgccggggtgccg                                                 >  4:116548‑M2/1‑27 (MQ=255)
                                                                                                                         ccgcgccgGCCAGTGCAGGGTCGGCCTgcggcgctgctgtacctgcatggcggcggctacgtggtgggcagcctcgattcgcatgacacgctgtgctggaacctggcgcaggatgccggggtgccg                                                 <  3:116548‑M2/126‑100 (MQ=255)
                                                                                                                         ccgcgccgGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGAGGACTCTTCGAACTgg                          <  4:158637/149‑1 (MQ=255)
                                                                                                                          cgcgccgGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGAGGACTCTTCGAACTggc                         <  2:182548/149‑1 (MQ=255)
                                                                                                                              ccgGCCAGTGCAGGGTCGGCCTgcggcgggcggtacctgcatggcggcggctacgtggtgggcagcctcgattcgcatgacacgctgtgctggaacctggcgcaggatgccggggtgccggtgattgccgtgggctaccggctggcgcc                     >  2:133681‑M2/1‑22 (MQ=255)
                                                                                                                                        cAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGACCTTGCCCGCAATCAGCGCCGAGGACTCTTCGAACTGGCGGCGCGCCTCGTcc           <  7:8010/149‑1 (MQ=255)
                                                                                                                                           ggTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAgcg                                              <  6:238630/111‑1 (MQ=255)
                                                                                                                                           ggTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAgcg                                              >  5:238630/1‑111 (MQ=255)
                                                                                                                                                 ccTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGAGGACTCTTCGAACTGGCGGCGCGCCTCGTCCGCCGCCAgg  >  7:235268/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GCCAGCCGGTAGCCCACGGCAATCACCGGCACCCCGGCATCCTGCGCCAGGTTCCAGCACAGCGTGTCATGCGAATCGAGGCTGCCCACCACGTAGCCGCCGCCATGCAGGTACAGCAGCGCCGCGCCGGCCAGTGCAGGGTCGGCCTGCGGCGGGCGGTACAAGCGCACCGGCAAGGTATGGCCATCGCGGGTGGTCAACGAAAGGTCGCTGATGCAGTCCGGCTCGTCGGCCTTGCCCGCAATCAGCGCCGAGGACTCTTCGAACTGGCGGCGCGCCTCGTCCGCCGCCAGG  >  NC_002947/4768435‑4768728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.