New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4786030 =	46 (0.910)	4 (0.080)	3/242	NT	9.4%	coding (1284/7887 nt)	pvdJ	non‑ribosomal peptide synthetase
	?	NC_002947	4786078 =	34 (0.720)					coding (1236/7887 nt)	pvdJ	non‑ribosomal peptide synthetase

GCAGCCGGCTGGCAGGTGCCGCGACCATGTCCTGCAACAACGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTGGTTGAGCTTGAACTGGAACAGCGGGTTATGGCTGAGGTTGCG  >  NC_002947/4785882‑4786176                                                                                                                                                     |                                                                                                                                                   gcatcaggagctgccgtttgagcaactggtcgatgcgctggccccagagcgcaacctcagccataacccgctgttccagttcaagctcaaccagaacgtcgcgggtgaagctgccggcggcgagcagcgcaagaccctcagcggtctgc                                                                                                                                                    >  6:90943‑M1/149‑149 (MQ=255)    gcCGGCTGGCAGGTGCCGCGACCATGTCCTGCAACAACGTGTGCAGGGCCGTCACCGGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAgg                                                                                                                                                 <  8:133541/149‑1 (MQ=255)     ccGGCTGGCAGGTGCCGCGACCATGTCCTGCAACAACGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGt                                                                                                                                                <  3:238945/149‑1 (MQ=255)     ccGGCTGGCAGGTGCCGCGACCATGTCCTGCAACAACGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATAGGTGAAGTCGAAGGCCAGGt                                                                                                                                                <  7:28547/149‑1 (MQ=255)     caggagctgccgtttgagcaactggtcgatgcgctggccccagagcgcaacctcagccataacccgctgttccagttcaagctcaaccagaacgtcgcgggtgaagctgccggcggcgagcagcgcaagaccctcagcggtctgCAGGt                                                                                                                                                <  6:159652‑M1/5‑1 (MQ=255)       ggCTGGCAGGTGCCGCGACCATGTCCTGCAACAACGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTc                                                                                                                                               >  1:201049/1‑148 (MQ=255)            gCAGGTGCCGCGACCATGTCCTGCAACAACGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAAc                                                                                                                                          <  6:15353/148‑1 (MQ=255)                            tGTCCTGCAACAACGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTc                                                                                                                         <  2:183344/149‑1 (MQ=255)                                cTGCAACAACGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAAcgc                                                                                                                                        <  1:135305/130‑1 (MQ=255)                                cTGCAACAACGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAAcgc                                                                                                                                        >  2:135305/1‑130 (MQ=255)                                cTGCAACAACGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACg                                                                                                                     >  7:67859/1‑149 (MQ=255)                                 tGCAACAACGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGACGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACgg                                                                                                                    >  1:176220/1‑149 (MQ=255)                                      caacGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTAct                                                                                                               <  1:136614/149‑1 (MQ=255)                                       tggccccagagcgcaacctcagccataacccgctgttccagttcaagctcaaccagaacgtcgcgggtgaagctgccggcggcgagcagcgcaagaccctcagcggtctgCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTActc                                                                                                              <  3:50086‑M1/39‑1 (MQ=255)                                       aacGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTActc                                                                                                              <  8:67859/149‑1 (MQ=255)                                         cGTGTGCAGGGCCGTCACCAGGCGCTCGATGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTAc                                                                                                                <  6:210641/145‑1 (MQ=255)                                         cGTGTGCAGGGCCGTCACCAGGCGCTCGATGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTAc                                                                                                                >  5:210641/1‑145 (MQ=255)                                         cGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTActcct                                                                                                            >  7:197232/1‑149 (MQ=255)                                          gtgtGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTActc                                                                                                              <  1:166789/146‑1 (MQ=255)                                          gtgtGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTActc                                                                                                              >  2:166789/1‑146 (MQ=255)                                                agcgcaacctcagccataacccgctgttccagttcaagctcaaccagaacgtcgcgggtgaagctgccggcggcgagcagcgcaagaccctcagcggtctgCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTg                                                                                                     >  4:50086‑M1/102‑149 (MQ=255)                                                aGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTg                                                                                                     >  4:133067/1‑149 (MQ=255)                                                 gcgcaacctcagccataacccgctgttccagttcaagctcaaccagaacgtcgcgggtgaagctgccggcggcgagcagcgcaagaccctcagcggtctgCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTg                                                                                                     >  8:232583‑M1/101‑148 (MQ=255)                                                 gcgcaacctcagccataacccgctgttccagttcaagctcaaccagaacgtcgcgggtgaagctgccggcggcgagcagcgcaagaccctcagcggtctgCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTg                                                                                                     <  7:232583‑M1/48‑1 (MQ=255)                                                  ggCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTTGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGcgcc                                                                                                                             <  8:290278/123‑1 (MQ=255)                                                  ggCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTGGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGcgcc                                                                                                                             >  7:290278/1‑123 (MQ=255)                                                      gTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCCACCTGCATAcc                                                                                               >  4:213056/1‑149 (MQ=255)                                                         aCCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCt                                                                                            >  2:212074/1‑149 (MQ=255)                                                             ggCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAATTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGcc                                                                                                                                                    >  3:290792/1‑89 (MQ=255)                                                             ggCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAgg                                                                                        <  2:227955/149‑1 (MQ=255)                                                              gcgcTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAggg                                                                                       >  7:278444/1‑149 (MQ=255)                                                                 cTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCt                                                                                    >  6:293810/1‑149 (MQ=255)                                                                         tGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCTCCGCTGAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCgctgc                                                                            <  1:212074/149‑1 (MQ=255)                                                                                    aaCAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCgg                                                                  <  8:197232/148‑1 (MQ=255)                                                                                         gTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCt                                                             >  6:140521/1‑148 (MQ=255)                                                                                          tCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACgg                                                                                                                    >  6:88746/1‑92 (MQ=255)                                                                                          tCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACgg                                                                                                                    <  5:88746/92‑1 (MQ=255)                                                                                            ggTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCa                                                          <  3:262144/148‑1 (MQ=255)                                                                                                     ggTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGt                                                >  2:222788/1‑149 (MQ=255)                                                                                                       tGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAAGGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTc                                              <  3:213056/149‑1 (MQ=255)                                                                                                       tGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGccgccg                                                                   <  7:21623/128‑1 (MQ=255)                                                                                                       tGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGccgccg                                                                   >  8:21623/1‑128 (MQ=255)                                                                                                          aGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTgg                                           <  5:293810/149‑1 (MQ=255)                                                                                                          aGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTg                                            <  5:140521/148‑1 (MQ=255)                                                                                                               gCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCCGCTTCACCCGCGACGTTCTGGTTGAg                                      >  7:174346/1‑149 (MQ=255)                                                                                                                ccTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTGGTTGAGc                                     <  5:250272/149‑1 (MQ=255)                                                                                                                    gATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGc                                                                                                    >  7:218031/1‑82 (MQ=255)                                                                                                                    gATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGc                                                                                                    <  8:218031/82‑1 (MQ=255)                                                                                                                    gATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTGGTTGAGCTTg                                  <  3:133067/148‑1 (MQ=255)                                                                                                                       aCCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTGGTTGAGCTTGAACt                              >  3:91131/1‑149 (MQ=255)                                                                                                                                  cATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTGGTTGAGCTTGAACTGGAACAGCggg                   <  8:278444/149‑1 (MQ=255)                                                                                                                                   aTCAGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTGGTTGAGCTTGAACTGGAACAGCGGGt                  >  6:168123/1‑149 (MQ=255)                                                                                                                                       gTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTGGTTGAGCTTGAACTGGAACAGCGGGTTATg              >  5:59396/1‑149 (MQ=255)                                                                                                                                        tGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTGGTTGAGCTTGAACTGGAACAGCGGGTTATgg             <  2:201049/149‑1 (MQ=255)                                                                                                                                           aGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTGGTTGAGCTTGAACTGGAACAGCGGGTTATGGCTg          <  4:91131/149‑1 (MQ=255)                                                                                                                                             tCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTGGTTGAGCTTGAACTGGAACAGCGGGTTATGGCTGAg        >  4:237731/1‑149 (MQ=255)                                                                                                                                                   gCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTGGTTGAGCTTGAACTGGAACAGCGGGTTATGGCTGAGGTTgcg  <  1:222788/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GCAGCCGGCTGGCAGGTGCCGCGACCATGTCCTGCAACAACGTGTGCAGGGCCGTCACCAGGCGCTCGACGGTGCTGGCCTTGAACAGGTCGGTTGCATAGGTGAAGTACGCCTGGATACCGTCGGCGCCATCGGTGAAGTCGAAGGCCAGGTCGAAACGCGCATCGGCGCCGCTCAACGGGTACTCCTCGACCTGCAGACCGCTGAGGGTCTTGCGCTGCTCGCCGCCGGCAGCTTCACCCGCGACGTTCTGGTTGAGCTTGAACTGGAACAGCGGGTTATGGCTGAGGTTGCG  >  NC_002947/4785882‑4786176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.