New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5094818	61 (1.210)	3 (0.060)	3/246	NT	5.1%	coding (388/699 nt)	hisM	histidine/lysine/arginine/ornithine ABC transporter permease
	?	NC_002947	= 5094848	54 (1.120)					coding (358/699 nt)	hisM	histidine/lysine/arginine/ornithine ABC transporter permease

GATCAGGGTGACGATCGACGCCAGGCTGGTGGTCTGCAGCATCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCTGGACAGCAGCGGCCAGAAGATACTCTCGCGCACTGCCT  >  NC_002947/5094672‑5094961                                                                                                                                                   |                                                                                                                                                gATCAGGGTGACGATCGACGCCAGGCTGGTGGTCTGCAGCATCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCtt                                                                                                                                               <  5:325740/149‑1 (MQ=255)   tCAGGGTGACGATCGACGCCAGGCTGGTGGTCTGCAGCATCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTc                                                                                                                                              >  2:246744/1‑148 (MQ=255)        gTGACGATCGACGCCAGGCTGGTGGTCTGCAGCATCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGAtctc                                                                                                                                        <  3:253214/149‑1 (MQ=255)        gTGACGATCGACGCCAGGCTGGTGGTCTGCAGCATCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGAtctc                                                                                                                                        <  6:212151/149‑1 (MQ=255)            cGATCGACGCCAGGCTGGTGGTCTGCAGCATCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGATACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGcc                                                                                                                                     <  4:25028/148‑1 (MQ=255)               tCGACGCCAGGCTGGTGGTCTGCAGCATCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCTCCATgc                                                                                                                                 >  5:65328/1‑149 (MQ=255)                  aCGCCAGGCTGGTGGTCTGCAGCATCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATgcggc                                                                                                                              >  7:194597/1‑149 (MQ=255)                     ccAGGCTGGTGGTCTGCAGCATCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTc                                                                                                                           <  4:231648/149‑1 (MQ=255)                             gtggtCTGCAGCATCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGa                                                                                                                    <  6:6653/148‑1 (MQ=255)                                   tGCAGCATCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGgctgcc                                                                                                             <  6:156297‑M2/149‑7 (MQ=255)                                    gcagcaTCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCctcaaggcgacgccgcatggcgagatcgaagctgcca                                                                                                            <  7:69655‑M1/149‑38 (MQ=255)                                     cagcaTCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCgg                                                                                                           >  7:12486/1‑149 (MQ=255)                                        catcatGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCCTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCaa                                                                                                        <  4:213218/149‑1 (MQ=255)                                         atcatGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAAt                                                                                                       >  5:60078/1‑149 (MQ=255)                                          ttcggATCTCTTGATTGCTGTTCTGATTCAGTGCCCGACGAAGTGCCGAAGGCAGCAGGTTGAGTCGGTAGATTTTCATGAGGGAAATTCCCATGGCCTTGTCTTCTTCGATCTCGCCATGCGGCGTCGCATTGAGGCTGCCGGCAATg                                                                                                      <  7:52857/145‑1 (MQ=255)                                                 cACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCaa                                                                                                        >  7:168084/1‑140 (MQ=255)                                                 cACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCaa                                                                                                        <  8:168084/140‑1 (MQ=255)                                                   cTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTcggcg                                                                                             <  5:156297/149‑1 (MQ=255)                                                   cTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTcggcg                                                                                             >  3:64523/1‑149 (MQ=255)                                                    ttCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATg                                                                                                      >  8:52857/1‑139 (MQ=255)                                                     tCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTcggcg                                                                                             >  7:2315/1‑147 (MQ=255)                                                     tCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTcggcg                                                                                             <  8:2315/147‑1 (MQ=255)                                                       cttGCTGTACTGCGGCAGTGCCCGTCGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACTTTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCATTGAGGCTGCCGGCAATGATTTCGGCGgtgt                                                                                         <  5:313410/148‑1 (MQ=255)                                                                cTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTgg                                                                                >  2:194253/1‑149 (MQ=255)                                                                cTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTg                                                                                 <  2:154926/148‑1 (MQ=255)                                                                   cGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGg                                                                                                                  >  1:119572‑M2/1‑111 (MQ=255)                                                                   cGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGg                                                                                                                  <  2:119572‑M2/112‑2 (MQ=255)                                                                    ggCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTAtt                                                                            >  2:70406/1‑149 (MQ=255)                                                                    ggCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTAtt                                                                            <  8:12486/149‑1 (MQ=255)                                                                       aGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGAt                                                                         <  6:157871/149‑1 (MQ=255)                                                                         tGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGc                                                                       <  8:194597/149‑1 (MQ=255)                                                                           cccGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCctcaaggcgacgccgcatggcgagatcgaagctgcc                                                                                                             <  3:77471‑M1/109‑37 (MQ=255)                                                                           cccGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCctcaaggcgacgccgcatggcgagatcgaagctgcc                                                                                                             >  4:77471‑M1/1‑73 (MQ=255)                                                                           cccGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGcc                                                                      >  6:244198/1‑148 (MQ=255)                                                                            ccGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCg                                                                     >  6:194094/1‑148 (MQ=255)                                                                              gACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAAc                                                                  <  6:36118/149‑1 (MQ=255)                                                                                    gTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCcagg                                                            <  5:244198/149‑1 (MQ=255)                                                                                     tGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGAt                                                                         >  6:153717/1‑135 (MQ=255)                                                                                     tGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACACcagg                                                            >  2:288476/1‑148 (MQ=255)                                                                                       ccGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCcaggcag                                                         >  6:162089/1‑149 (MQ=255)                                                                                       ccGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCcaggcag                                                         >  4:157981/1‑149 (MQ=255)                                                                                       ccGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACACcaggcag                                                         <  1:288476/149‑1 (MQ=255)                                                                                         gAAGGCAGGAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGt                                                                               >  3:41467/1‑125 (MQ=255)                                                                                         gAAGGCAGGAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGt                                                                               <  4:41467/125‑1 (MQ=255)                                                                                          aaGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAg                                                                                                                   <  5:102911/88‑1 (MQ=255)                                                                                          aaGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAg                                                                                                                   >  6:102911/1‑88 (MQ=255)                                                                                          aaGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGgcg                                                      >  7:243774/1‑149 (MQ=255)                                                                                          aaGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGgcg                                                      >  4:254285/1‑149 (MQ=255)                                                                                              cagcagGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGa                                                  <  1:194253/149‑1 (MQ=255)                                                                                               agcagGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCcaggcagtgcgc                                                    >  8:101071/1‑141 (MQ=255)                                                                                                 cagGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAgg                                               <  5:194094/149‑1 (MQ=255)                                                                                                   ggATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTa                                             <  3:254285/149‑1 (MQ=255)                                                                                                    gATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGgctgc                                                                                                              <  7:120837‑M2/83‑6 (MQ=255)                                                                                                    gATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGgctgc                                                                                                              >  8:120837‑M2/1‑78 (MQ=255)                                                                                                    gATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAg                                            >  1:132036/1‑149 (MQ=255)                                                                                                        cggcggTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCTCTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAgcgc                                         <  6:65328/148‑1 (MQ=255)                                                                                                        cggcggTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCt                                        <  4:64523/149‑1 (MQ=255)                                                                                                            ggTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTa                                             <  2:131956/140‑1 (MQ=255)                                                                                                            ggTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTa                                             >  1:131956/1‑140 (MQ=255)                                                                                                             gTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCTGGAca                                   <  6:60078/149‑1 (MQ=255)                                                                                                                  ttttCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCTGGACagcagc                              >  2:22878/1‑149 (MQ=255)                                                                                                                      cATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCTGGACAGCAGCGGc                           <  1:22878/148‑1 (MQ=255)                                                                                                                          cgcgACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCTGGACAGCAGCGGCCagaa                      <  2:132036/149‑1 (MQ=255)                                                                                                                          cgcgACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCTGGACAGCAGCGGCCag                        >  2:75210/1‑147 (MQ=255)                                                                                                                            cgACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCTGGACAGCAGCGGCCagaaga                    <  3:157981/149‑1 (MQ=255)                                                                                                                                 ttCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCTGGACAGCAGCGGCCAGAAGATActc               >  2:292880/1‑149 (MQ=255)                                                                                                                                    ccATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCTGGACAGCAGCGGCCAGAAGATACtctc             <  1:292880/148‑1 (MQ=255)                                                                                                                                    ccATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCTGGACAGCAGCGGCCAGAAGATACTCTcg            >  3:177361/1‑149 (MQ=255)                                                                                                                                     cATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCCGGCGCAGAAGGTAGCGCTGGACAGCAGCGGCCAGAAGATACTCTcgc           >  4:286818/1‑149 (MQ=255)                                                                                                                                          ccTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCTGGACAGCAGCGGCCAGAAGATACTCTCGCGCACt      <  5:160403/149‑1 (MQ=255)                                                                                                                                            ttGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCTGGACAGCAGCGGCCAGAAGATACTCTCGCGCACTGc    >  4:192391/1‑149 (MQ=255)                                                                                                                                             tGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGgctgccaaggccatgggaatgtcgcgcatgaaaatgtaccgccgcatcctgctgccttcggcactgcgtcgggcactgccgcagtacagcaatgaagtgatcatgatgctgc   <  7:69655‑M2/149‑113 (MQ=255)                                                                                                                                              ggCAGCctcaaggcgacgccgcatggcgagatcgaagctgccaaggccatgggaatgtcgcgcatgaaaatgtaccgccgcatcctgctgccttcggcactgcgtcgggcactgccgcagtacagcaatgaagtgatcatgatgctgca  <  6:156297‑M1/149‑144 (MQ=255)                                                                                                                                              ggCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGgctgccaaggccatgggaatgtcgcgcatgaaaatgtaccgccgcatcctgctgccttcggcactgcgtcggg                                          <  3:77471‑M2/109‑74 (MQ=255)                                                                                                                                              ggCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGgctgccaaggccatgggaatgtcgcgcatgaaaatgtaccgccgcatcctgctgccttcggcactgcgtcggg                                          >  4:77471‑M2/1‑36 (MQ=255)                                                                                                                                               gCAGCctcaaggcgacgccgcatggcgagatcgaagctgccaaggccatgggaatgtcgcgcatgaaaatgtaccgccgcatc                                                                   >  8:120837‑M1/1‑5 (MQ=255)                                                                                                                                               gCAGCctcaaggcgacgccgcatggcgagatcgaagctgccaaggccatgggaatgtcgcgcatgaaaatgtaccgccgcatc                                                                   <  7:120837‑M1/83‑79 (MQ=255)                                                                                                                                                   cctcaaggcgacgccgcatggcgagatcgaagctgccaaggccatgggaatgtcgcgcatgaaaatgtaccgccgcatcctgctgccttcggcactgcgtcgggcactgccg                                  <  2:119572‑M1/112‑112 (MQ=255)                                                                                                                                                   cctcaaggcgacgccgcatggcgagatcgaagctgccaaggccatgggaatgtcgcgcatgaaaatgtaccgccgcatcctgctgccttcggcactgcgtcgggcactgccg                                  >  1:119572‑M1/1‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                GATCAGGGTGACGATCGACGCCAGGCTGGTGGTCTGCAGCATCATGATCACTTCATTGCTGTACTGCGGCAGTGCCCGACGCAGTGCCGAAGGCAGCAGGATGCGGCGGTACATTTTCATGCGCGACATTCCCATGGCCTTGGCAGCTTCGATCTCGCCATGCGGCGTCGCCTTGAGGCTGCCGGCAATGATTTCGGCGGTGTAGGCACTGGTATTGATGCCGAACGCCAGGCAGGCGCAGAAGGTAGCGCTGGACAGCAGCGGCCAGAAGATACTCTCGCGCACTGCCT  >  NC_002947/5094672‑5094961

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.