New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5521684 =52 (1.030)3 (0.060) 3/248 NT 6.1% coding (102/948 nt) lip lipase
?NC_002947 5521716 = 43 (0.890)coding (70/948 nt) lip lipase

CGCCAGCAACTGCTCGCCACGTACCTCGCTGGAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAGACC  >  NC_002947/5521540‑5521832
                                                                                                                                                |                                                                                                                                                    
ttgtacatggtcccgctccttgcaaagggtctgtgtggttttgcaccacagcgcgcgccaggagttcgattgcgatggtcatgatggccgctgtagtgttggcccgtcgtagacgcaaaggagctgcggcaatgcagcaggattTGgca                                                                                                                                                  <  4:254849‑M1/5‑1 (MQ=255)
 gCCAGCAACTCCGCGCCACGTACCTCGCTGGACTGCAGCCGCGAAACCTGCCCCGGACACACCTGCCCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTCGGGGGAGAGCACCATCCGGCCACACCCGAGCATGCCGGgcac                                                                                                                                                 <  6:267340/149‑1 (MQ=255)
   cAGCAACTGCTCTCCACGTACCTCGCTGGAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGgc                                                                                                                                                   <  8:154142/145‑1 (MQ=255)
   cAGCAACTGCTCGCCACGTACCTCGCTGGAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGgcac                                                                                                                                                 >  5:158824/1‑147 (MQ=255)
    aGCAACTGCTCGCCACGTACCTCGCTGGAATGCATCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGgcaccag                                                                                                                                              <  7:80096/149‑1 (MQ=255)
    aGCAACTGCTCGCCAAGTACCTCGCTGGAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGgcaccag                                                                                                                                              <  3:87464/149‑1 (MQ=255)
       aaCTGCTCGCCACGTACCTCGCTGGAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGgcacca                                                                                                                                               <  1:18298/145‑1 (MQ=255)
       aaCTGCTCGCCACGTACCTCGCTGGAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGgcacca                                                                                                                                               >  2:18298/1‑145 (MQ=255)
          tGCTCGCCACGTACCTCGCTGGAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCCCCCTCCGCACACACCCGAGCATGCCTGGcaccagcaccag                                                                                                                                        >  4:193900/1‑149 (MQ=255)
                       ccTCGCTGGAATGCAGCGGCGAAACCTTCACCGGAAACACCTGCGCCCCTCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGtt                                                                                                                           <  8:220693/149‑1 (MQ=255)
                       ccTCGCTGGAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCTCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACGATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGtt                                                                                                                           <  3:193900/149‑1 (MQ=255)
                       ccTCGCTGGAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGtt                                                                                                                           <  3:16519/149‑1 (MQ=255)
                              ctgtgtggttttgaaccacagcgcgcgccaggagttcgattgcgatggtcatgatggccgctgtagtgttggcccgtcgtacacgcaaaggagctgcggcaatgcagcaggattTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAAt                                                                                                                    >  3:157309‑M1/115‑149 (MQ=255)
                               gAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAACCCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAAt                                                                                                                    >  3:198379/1‑148 (MQ=255)
                                     aGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCctgctg                                                                                                             >  1:77560/1‑149 (MQ=255)
                                     aGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCctgctg                                                                                                             >  8:14909/1‑149 (MQ=255)
                                             ccacagcgcgcgccaggagttcgattgcgatggtcatgatggccgctgtagtgttggcccgtcgtacacgcaaaggagctgcggcaatgcagcaggattTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATc                                                                                                                   >  5:162488‑M1/100‑135 (MQ=255)
                                             ccacagcgcgcgccaggagttcgattgcgatggtcatgatggccgctgtagtgttggcccgtcgtacacgcaaaggagctgcggcaatgcagcaggattTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATc                                                                                                                   <  6:162488‑M1/36‑1 (MQ=255)
                                              aCCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCg                                                                                                     >  8:7994/1‑148 (MQ=255)
                                               ccTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTg                                                                                                                          <  1:295047/126‑1 (MQ=255)
                                               ccTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTg                                                                                                                          >  2:295047/1‑126 (MQ=255)
                                                cTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAg                                                                                                  >  4:17088/1‑149 (MQ=255)
                                                       ggAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCttt                                                                                           <  7:7994/149‑1 (MQ=255)
                                                         aaaCACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGc                                                                                         <  8:23474/149‑1 (MQ=255)
                                                         aaaCACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGc                                                                                         <  7:288977/149‑1 (MQ=255)
                                                           acacCTGCGCCCCGCCCTTACGCAATGCCGGCACTATTCAGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTTCTGCATTGCCGCAGCTCCTTTGCgt                                                                                       <  5:190942/149‑1 (MQ=255)
                                                               cTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCaccagcaccagc                                                                                                                                       >  5:269375/1‑97 (MQ=255)
                                                               cTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCaccagcaccagc                                                                                                                                       <  6:269375/97‑1 (MQ=255)
                                                               cTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTac                                                                                   >  6:35471/1‑149 (MQ=255)
                                                               cTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTac                                                                                   <  7:14909/149‑1 (MQ=255)
                                                                     cccgcccTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACggg                                                                             >  4:69243/1‑149 (MQ=255)
                                                                     cccgcccTTGCGCAACGCCGGCACAAAGCCGAACCAGTAGGGGTAGAGAACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCCTGTACGACggg                                                                             >  5:3815/1‑149 (MQ=255)
                                                                      ccgcccTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGc                                                                            >  7:55043/1‑149 (MQ=255)
                                                                       cgcccTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGc                                                                            >  7:50060/1‑148 (MQ=255)
                                                                            ttGCGCAAGGCCGGCAGAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACGAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCTTGTACGACGGTCCAacac                                                                      <  6:3815/149‑1 (MQ=255)
                                                                                gcAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTa                                                                    >  2:192889/1‑147 (MQ=255)
                                                                                gcAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTa                                                                    <  1:192889/147‑1 (MQ=255)
                                                                                          cacaATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAAACCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCcatca                                                        >  5:180545/1‑149 (MQ=255)
                                                                                             aaTGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGa                                                     <  5:35471/149‑1 (MQ=255)
                                                                                               tGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGAc                                                    >  8:263435/1‑148 (MQ=255)
                                                                                                   gAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCg                                               <  7:210264/149‑1 (MQ=255)
                                                                                                               gTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTcc                                   >  7:2164/1‑149 (MQ=255)
                                                                                                                  gagCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGc                                                                                                    >  3:196102/1‑81 (MQ=255)
                                                                                                                  gagCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGc                                                                                                    <  4:196102/81‑1 (MQ=255)
                                                                                                                  gagCACCATCCGGACAAACCCGACCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTg                                 <  6:158824/148‑1 (MQ=255)
                                                                                                                     cACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGgcgc                             >  4:158757/1‑149 (MQ=255)
                                                                                                                             ggACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCTGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCtgtg                     <  3:69243/149‑1 (MQ=255)
                                                                                                                             ggACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCtgtg                     <  7:263435/149‑1 (MQ=255)
                                                                                                                                cAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGtt                  <  3:158757/149‑1 (MQ=255)
                                                                                                                                   aCCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGgcgcg                            <  2:194221/136‑1 (MQ=255)
                                                                                                                                   aCCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGgcgcg                            >  1:194221/1‑136 (MQ=255)
                                                                                                                                    cccGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCtgtg                     >  6:34062/1‑142 (MQ=255)
                                                                                                                                    cccGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCtgtg                     <  5:34062/142‑1 (MQ=255)
                                                                                                                                       gAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAAcc           <  2:77560/149‑1 (MQ=255)
                                                                                                                                        aGCATGCCTGGCACCAGGACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACca          <  4:198379/149‑1 (MQ=255)
                                                                                                                                        aGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGAGCATCGCAATCTAACTCCTGGCGCGCGCTGTGGTTCAAAACca          <  6:180545/149‑1 (MQ=255)
                                                                                                                                          cATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACcaca        <  3:17088/149‑1 (MQ=255)
                                                                                                                                              ccTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAGa    <  2:57764/149‑1 (MQ=255)
                                                                                                                                              ccTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAGa    >  3:180808/1‑149 (MQ=255)
                                                                                                                                               cTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCgtg                                                                                      >  6:7634/1‑66 (MQ=255)
                                                                                                                                               cTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCgtg                                                                                      <  5:7634/66‑1 (MQ=255)
                                                                                                                                                TGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAGAcc  <  1:135028‑M1/149‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
CGCCAGCAACTGCTCGCCACGTACCTCGCTGGAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAGACC  >  NC_002947/5521540‑5521832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.