New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5521684 =	52 (1.030)	3 (0.060)	3/248	NT	6.1%	coding (102/948 nt)	lip	lipase
	?	NC_002947	5521716 =	43 (0.890)					coding (70/948 nt)	lip	lipase

GGAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAGACCCTTTGCAAGGAGCGGGACCATGTACAA  >  NC_002947/5521570‑5521859                                                                                                                                                   |                                                                                                                                                ctgtgtggttttgaaccacagcgcgcgccaggagttcgattgcgatggtcatgatggccgctgtagtgttggcccgtcgtacacgcaaaggagctgcggcaatgcagcaggattTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAAt                                                                                                                                               >  3:157309‑M1/115‑149 (MQ=255)  gAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAACCCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAAt                                                                                                                                               >  3:198379/1‑148 (MQ=255)        aGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCctgctg                                                                                                                                        >  1:77560/1‑149 (MQ=255)        aGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCctgctg                                                                                                                                        >  8:14909/1‑149 (MQ=255)                ccacagcgcgcgccaggagttcgattgcgatggtcatgatggccgctgtagtgttggcccgtcgtacacgcaaaggagctgcggcaatgcagcaggattTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATc                                                                                                                                              >  5:162488‑M1/100‑135 (MQ=255)                ccacagcgcgcgccaggagttcgattgcgatggtcatgatggccgctgtagtgttggcccgtcgtacacgcaaaggagctgcggcaatgcagcaggattTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATc                                                                                                                                              <  6:162488‑M1/36‑1 (MQ=255)                 aCCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCg                                                                                                                                >  8:7994/1‑148 (MQ=255)                   cTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAg                                                                                                                             >  4:17088/1‑149 (MQ=255)                          ggAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCttt                                                                                                                      <  7:7994/149‑1 (MQ=255)                            aaaCACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGc                                                                                                                    <  8:23474/149‑1 (MQ=255)                            aaaCACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGc                                                                                                                    <  7:288977/149‑1 (MQ=255)                              acacCTGCGCCCCGCCCTTACGCAATGCCGGCACTATTCAGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTTCTGCATTGCCGCAGCTCCTTTGCgt                                                                                                                  <  5:190942/149‑1 (MQ=255)                                  cTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTac                                                                                                              <  7:14909/149‑1 (MQ=255)                                  cTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTac                                                                                                              >  6:35471/1‑149 (MQ=255)                                        cccgcccTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACggg                                                                                                        >  4:69243/1‑149 (MQ=255)                                        cccgcccTTGCGCAACGCCGGCACAAAGCCGAACCAGTAGGGGTAGAGAACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCCTGTACGACggg                                                                                                        >  5:3815/1‑149 (MQ=255)                                         ccgcccTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGc                                                                                                       >  7:55043/1‑149 (MQ=255)                                          cgcccTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGc                                                                                                       >  7:50060/1‑148 (MQ=255)                                               ttGCGCAAGGCCGGCAGAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACGAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCTTGTACGACGGTCCAacac                                                                                                 <  6:3815/149‑1 (MQ=255)                                                   gcAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTa                                                                                               <  1:192889/147‑1 (MQ=255)                                                   gcAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTa                                                                                               >  2:192889/1‑147 (MQ=255)                                                             cacaATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAAACCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCcatca                                                                                   >  5:180545/1‑149 (MQ=255)                                                                aaTGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGa                                                                                <  5:35471/149‑1 (MQ=255)                                                                  tGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGAc                                                                               >  8:263435/1‑148 (MQ=255)                                                                      gAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCg                                                                          <  7:210264/149‑1 (MQ=255)                                                                                  gTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTcc                                                              >  7:2164/1‑149 (MQ=255)                                                                                     gagCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGc                                                                                                                               <  4:196102/81‑1 (MQ=255)                                                                                     gagCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGc                                                                                                                               >  3:196102/1‑81 (MQ=255)                                                                                     gagCACCATCCGGACAAACCCGACCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTg                                                            <  6:158824/148‑1 (MQ=255)                                                                                        cACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGgcgc                                                        >  4:158757/1‑149 (MQ=255)                                                                                                ggACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCTGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCtgtg                                                <  3:69243/149‑1 (MQ=255)                                                                                                ggACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCtgtg                                                <  7:263435/149‑1 (MQ=255)                                                                                                   cAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGtt                                             <  3:158757/149‑1 (MQ=255)                                                                                                      aCCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGgcgcg                                                       >  1:194221/1‑136 (MQ=255)                                                                                                      aCCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGgcgcg                                                       <  2:194221/136‑1 (MQ=255)                                                                                                       cccGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCtgtg                                                <  5:34062/142‑1 (MQ=255)                                                                                                       cccGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCtgtg                                                >  6:34062/1‑142 (MQ=255)                                                                                                          gAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAAcc                                      <  2:77560/149‑1 (MQ=255)                                                                                                           aGCATGCCTGGCACCAGGACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACca                                     <  4:198379/149‑1 (MQ=255)                                                                                                           aGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGAGCATCGCAATCTAACTCCTGGCGCGCGCTGTGGTTCAAAACca                                     <  6:180545/149‑1 (MQ=255)                                                                                                             cATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACcaca                                   <  3:17088/149‑1 (MQ=255)                                                                                                               gatttggcaacgcgatacccgctggtgctggtgccaAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTgg                                               <  6:162488‑M2/99‑1 (MQ=255)                                                                                                               gatttggcaacgcgatacccgctggtgctggtgccaAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTgg                                               >  5:162488‑M2/37‑135 (MQ=255)                                                                                                                atttggcaacgcgatacccgctggtgctggtgccaAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAg                                >  3:157309‑M2/36‑149 (MQ=255)                                                                                                                 ccTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAGa                               <  2:57764/149‑1 (MQ=255)                                                                                                                 ccTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAGa                               >  3:180808/1‑149 (MQ=255)                                                                                                                  cTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCgtg                                                                                                                 >  6:7634/1‑66 (MQ=255)                                                                                                                  cTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCgtg                                                                                                                 <  5:7634/66‑1 (MQ=255)                                                                                                                   TGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAGAcc                             <  1:135028‑M1/149‑1 (MQ=255)                                                                                                                      CACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAGACCCtt                          >  8:2164‑M1/1‑149 (MQ=255)                                                                                                                               cagcGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAGACCCTTTGCAAGGAg                 <  8:50060/149‑1 (MQ=255)                                                                                                                                    ggTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATTGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAGACCCTTTGCAAGGAGCGGGa            <  8:55043/149‑1 (MQ=255)                                                                                                                                              tgccaAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTCTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTGCAAAACCACACAGACCCTTTGCAAGGAGCGGGACCATGTACaa  <  4:254849‑M2/144‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                GGAATGCAGCGGCGAAACCTGCACCGGAAACACCTGCGCCCCGCCCTTGCGCAAGGCCGGCACAATGCCGAACCAGTAGGGGTAGAGCACCATCCGGACAAACCCGAGCATGCCTGGCACCAGCACCAGCGGGTATCGCGTTGCCAAATCCTGCTGCATTGCCGCAGCTCCTTTGCGTGTACGACGGGCCAACACTACAGCGGCCATCATGACCATCGCAATCGAACTCCTGGCGCGCGCTGTGGTTCAAAACCACACAGACCCTTTGCAAGGAGCGGGACCATGTACAA  >  NC_002947/5521570‑5521859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.