New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5654243 =	55 (1.090)	3 (0.060)	3/246	NT	5.9%	coding (232/1164 nt)	pgk	phosphoglycerate kinase
	?	NC_002947	5654288 =	43 (0.900)					coding (187/1164 nt)	pgk	phosphoglycerate kinase

CGCCAGCTCGTCGGCGTTCTTTTTCTCGCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCGGCAGCGCTGCCAGGATACGCGCATCGCTGGC  >  NC_002947/5654097‑5654381                                                                                                                                                   |                                                                                                                                           cgcCAGCTCGTCGGCGTTCTTTTTCTCGCCCTTGTTGAAGCGCACGTTCTCGTACAGCTCCAGTTCACCGGCCTGTACCGCGACACCGCCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCg                                                                                                                                           <  3:99445/148‑1 (MQ=255) cgcCAGCTCGTCGGCGTTCTTTTTCTCGCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGa                                                                                                                                          >  6:301387/1‑149 (MQ=255)  cgcgtactgatccgcgaagacctcaacgtgcctgtgaaggacggtgtggtagccagcgatgcgcgtatcctggcagcgctgccgaccatcaagctggccctggagaagggcgcagcggtaatggtctgctcgcacttgggccgccCGAc                                                                                                                                         >  4:176740‑M1/146‑149 (MQ=255)          gtcgGCGTTCTTTTTCTCGCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCtt                                                                                                                                   >  1:408/1‑147 (MQ=255)           tcgGCGTTCTTTTTCTCGCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAg                                                                                                                                <  1:142554/149‑1 (MQ=255)                gTTCTTTTTCTCGCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCtt                                                                                                                                   <  5:39137/141‑1 (MQ=255)                gTTCTTTTTCTCGCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCtt                                                                                                                                   >  6:39137/1‑141 (MQ=255)                  tCTTTTTCTCGCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTtc                                                                                                                         >  6:122116/1‑149 (MQ=255)                      tttCTCGCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTtct                                                                                                                        <  5:134814/146‑1 (MQ=255)                      tttCTCGCCCGTGTTGAAGCGCACGTTCTCGAACAGCGCCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCgg                                                                                                                     >  1:219829/1‑149 (MQ=255)                       ttCTCGCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCgg                                                                                                                     <  2:199484/148‑1 (MQ=255)                          tcGCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGa                                                                                                                                 <  1:64414/133‑1 (MQ=255)                          tcGCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGa                                                                                                                                 >  2:64414/1‑133 (MQ=255)                          tcGCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCa                                                                                                                   >  6:166337/1‑147 (MQ=255)                            gCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCaga                                                                                                                 <  7:299265/147‑1 (MQ=255)                                   ttgAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGcc                                                                                                        >  5:176771/1‑149 (MQ=255)                                   ttgAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGc                                                                                                         <  2:408/148‑1 (MQ=255)                                      aaGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCtt                                                                                                      <  2:219829/148‑1 (MQ=255)                                       aGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTtcg                                                                                                    <  6:176771/149‑1 (MQ=255)                                              gTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCGCGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTtc                                                                                                                         <  2:213414/121‑1 (MQ=255)                                              gTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCGCGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTtc                                                                                                                         >  1:213414/1‑121 (MQ=255)                                               ttCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGggcg                                                                                            >  5:294790/1‑149 (MQ=255)                                                tggtagccagcgatgcgcgtatcctggcagcgctgccgaccatcaagctggccctggagaagggcgcagcggtaatggtctgctcgcacttgggccgccCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGggcg                                                                                            >  2:295590‑M1/100‑148 (MQ=255)                                                 ctcGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGggcgg                                                                                           <  1:35628/148‑1 (MQ=255)                                                 ctcGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGggcgg                                                                                           <  4:33509/148‑1 (MQ=255)                                                 ctcGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGggcgg                                                                                           <  7:296054/148‑1 (MQ=255)                                                   cGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGcc                                                                                         >  8:149897/1‑148 (MQ=255)                                                      aCAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGc                                                                                                         >  5:55711/1‑129 (MQ=255)                                                      aCAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGc                                                                                                         <  6:55711/129‑1 (MQ=255)                                                       cAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGt                                                                                    <  3:107371/149‑1 (MQ=255)                                                          cACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCg                                                                                 >  7:70903/1‑149 (MQ=255)                                                           aCCAGTTGACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCATCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGa                                                                                <  3:282702/149‑1 (MQ=255)                                                            ccAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCag                                                                                                                  <  6:159448/114‑1 (MQ=255)                                                            ccAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCag                                                                                                                  >  5:159448/1‑114 (MQ=255)                                                             cAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAg                                                                               >  4:227245/1‑148 (MQ=255)                                                             cAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGc                                                                              <  1:148044/149‑1 (MQ=255)                                                                  cACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGAc                                                                          <  5:12128/148‑1 (MQ=255)                                                                     cGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCAt                                                                       >  2:285194/1‑148 (MQ=255)                                                                       gCCTGTACCGCGACACCTGCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTAc                                                                    <  6:32743/149‑1 (MQ=255)                                                                          tGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCTGCCGAGaacagcc                                                                                                         <  2:77115/109‑6 (MQ=255)                                                                          tGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCTGCCGAGaacagcc                                                                                                         >  1:77115/1‑104 (MQ=255)                                                                            agcgctgccgaccatcaagctggccctggagaagggcgcagcggtaatggtctgctcgcacttgggccgccCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGggc                                                                                             >  1:224226‑M1/72‑119 (MQ=255)                                                                            agcgctgccgaccatcaagctggccctggagaagggcgcagcggtaatggtctgctcgcacttgggccgccCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGggc                                                                                             <  2:224226‑M1/48‑1 (MQ=255)                                                                                 cgACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGccc                                                          <  5:166337/149‑1 (MQ=255)                                                                                   acacCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCATGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAg                                                                               <  7:117113/126‑1 (MQ=255)                                                                                   acacCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAAGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAg                                                                               >  8:117113/1‑126 (MQ=255)                                                                                                    ggCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGAc                                                                          >  5:93377/1‑114 (MQ=255)                                                                                                    ggCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGAc                                                                          <  6:93377/114‑1 (MQ=255)                                                                                                      cAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATg                                     >  8:236277/1‑149 (MQ=255)                                                                                                      cAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATg                                     <  3:227245/149‑1 (MQ=255)                                                                                                        aCCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGt                                   <  7:236277/149‑1 (MQ=255)                                                                                                             cGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCGGCa                              <  1:285194/149‑1 (MQ=255)                                                                                                                              gggCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCTGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCGGCAGCGCTGCCAGGATAcgc             <  6:105098/149‑1 (MQ=255)                                                                                                                              gggCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCGGCAGCGCTGCCAGGATAcgc             >  4:104419/1‑149 (MQ=255)                                                                                                                               ggCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCgg                                >  2:111278/1‑129 (MQ=255)                                                                                                                                gCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCGGCAGCGCTGCCAGGATACgcgc           <  5:301387/149‑1 (MQ=255)                                                                                                                                       tCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCGGCAGCGCTGCCAGGa                  >  1:291917/1‑135 (MQ=255)                                                                                                                                       tCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCGGCAGCGCTGCCAGGa                  <  2:291917/135‑1 (MQ=255)                                                                                                                                       tCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCGGCAGCGCTGCCAGGATACGCGCATCGCTg    >  5:99601/1‑149 (MQ=255)                                                                                                                                       tCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCGGCAGCGCTGCCAGGATACGCGCATAGCTg    >  7:108300/1‑149 (MQ=255)                                                                                                                                          ggTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCGGCAGCGCTGCCAGGATACGCGCATCGCTGGc  >  7:281270/1‑148 (MQ=255)                                                                                                                                               tCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCGGCAGCGCTGCCAGGATACGCGCATCGCTg    <  3:195421/141‑1 (MQ=255)                                                                                                                                               tCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCGGCAGCGCTGCCAGGATACGCGCATCGCTg    >  4:195421/1‑141 (MQ=255)                                                                                                                                                   |                                                                                                                                           CGCCAGCTCGTCGGCGTTCTTTTTCTCGCCCTTGTTGAAGCGCACGTTCTCGAACAGCACCAGTTCACCGGCCTGTACCGCGACACCGTCCAGGTAGTCGGCAACCAGCGGCACGTCGCGGCCCAGGGCCTTGCTCAGGTAATCGGCGACCGGCTTGAGGCTGTTCTCGGCAGAGAATTCGCCTTCGGTCGGGCGGCCCAAGTGCGAGCAGACCATTACCGCTGCGCCCTTCTCCAGGGCCAGCTTGATGGTCGGCAGCGCTGCCAGGATACGCGCATCGCTGGC  >  NC_002947/5654097‑5654381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.