New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5673501	54 (1.070)	3 (0.060)	3/246	NT	5.0%	coding (744/1881 nt)	rhlE‑II	ATP‑dependent RNA helicase
	?	NC_002947	= 5673537	62 (1.290)					coding (780/1881 nt)	rhlE‑II	ATP‑dependent RNA helicase

ACCTCGCCGACAAGCTCCTGCACAACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGG  >  NC_002947/5673356‑5673646                                                                                                                                                  |                                                                                                                                                  aCCTCGCCGACAAGCTCCTGCACAACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTgg                                                                                                                                                <  7:57798/149‑1 (MQ=255) aCCTCGCCGACAAGCTCCTGCACAACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTgg                                                                                                                                                >  1:287155/1‑149 (MQ=255)    tCGCCGACAAGCTCCTGCACAACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGaa                                                                                                                                             >  2:313965/1‑149 (MQ=255)       ccGACAAGCTCCTGCACAACCCGTAGCGTATCGTGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGTAACAg                                                                                                                                          <  8:273422/149‑1 (MQ=255)       ccGACAAGCTCCTGCACAACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAg                                                                                                                                          <  2:26476/149‑1 (MQ=255)         gACAAGCTCCTGCACAACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAggt                                                                                                                                        <  2:287155/149‑1 (MQ=255)              gCTCCTGCACAACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAggtgttgg                                                                                                                                   >  3:241121/1‑149 (MQ=255)               cTCCTGCACAACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAggtgttggt                                                                                                                                  <  4:308623/149‑1 (MQ=255)                  cTGCACAACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAggtgttggtgtt                                                                                                                               >  1:199001/1‑149 (MQ=255)                  cTGCACAACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAggtgttggtgtt                                                                                                                               >  1:203683/1‑149 (MQ=255)                   tGCACAACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAggtgttggtgtt                                                                                                                               >  2:162191/1‑148 (MQ=255)                     cacaACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCAc                                                                                                                            >  8:50148/1‑149 (MQ=255)                       caACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCAccc                                                                                                                          >  5:304267/1‑149 (MQ=255)                             ggAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAAcc                                                                                                                     >  8:56218/1‑148 (MQ=255)                                 cGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCa                                                                                                                <  4:241121/149‑1 (MQ=255)                                       gAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATggcg                                                                                                           >  2:199001‑M2/1‑144 (MQ=255)                                       gAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATggcg                                                                                                           >  2:203683‑M2/1‑144 (MQ=255)                                        aGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATggcgc                                                                                                          <  1:24392‑M2/148‑6 (MQ=255)                                          gTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCatgcttggttcgggtgaacaccaacacctgttcccaggcgcc                                                                                                         >  4:183732‑M1/1‑105 (MQ=255)                                           tCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCatgcttggttcgggtgaacaccaacacctgttcccaggcgcccag                                                                                                      <  3:183732‑M1/149‑46 (MQ=255)                                             aCCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCatgcttggttcgggtgaacaccaacacctgttcccaggcgcccagg                                                                                                     <  1:12680‑M1/148‑47 (MQ=255)                                                    cgAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGcc                                                                                             >  3:126590/1‑149 (MQ=255)                                                            accGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGTGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCt                                                                                     <  1:129155/149‑1 (MQ=255)                                                                  gAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCAGCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGaaaa                                                                               <  1:227308/149‑1 (MQ=255)                                                                  gAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGaaaa                                                                               <  1:162191/149‑1 (MQ=255)                                                                      gTATCGAGCAGCGGGTATATCGGCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCTCCTTGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCTAGTACCTGGAAAAGCaa                                                                           <  5:123790/149‑1 (MQ=255)                                                                      gTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCaa                                                                           <  2:24392/149‑1 (MQ=255)                                                                       tATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAg                                                                          <  4:126590/149‑1 (MQ=255)                                                                        aTCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGACGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGTCCGAGTACCTGGAAAAGCAAgg                                                                         >  1:242654/1‑149 (MQ=255)                                                                             gcagcGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGa                                                                    <  6:304267/149‑1 (MQ=255)                                                                               agcGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGAcc                                                                  <  7:77158/149‑1 (MQ=255)                                                                                   ggTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGAccgccg                                                              >  5:13428/1‑149 (MQ=255)                                                                                   ggTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGAccgccg                                                              >  1:122178/1‑149 (MQ=255)                                                                                      atatCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCACCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGAccgccgccg                                                           >  3:169116/1‑149 (MQ=255)                                                                                        atCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACcgccgccgc                                                          >  5:255217/1‑148 (MQ=255)                                                                                           gcctgcctGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATc                                                      <  7:56218/149‑1 (MQ=255)                                                                                               gcctgccAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACg                                                  >  4:311968/1‑149 (MQ=255)                                                                                                cctgccAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGa                                                        >  6:94403/1‑142 (MQ=255)                                                                                                cctgccAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGa                                                        <  5:94403/142‑1 (MQ=255)                                                                                                cctgccAGCCACAAGCGTGCCTTGCTGACGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACgg                                                 <  2:242654/149‑1 (MQ=255)                                                                                                  tgccAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCaa                                                                           >  3:272610/1‑121 (MQ=255)                                                                                                  tgccAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCaa                                                                           <  4:272610/121‑1 (MQ=255)                                                                                                     cagccaCAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGcaac                                             >  2:301366/1‑148 (MQ=255)                                                                                                      agccaCAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGcaac                                             >  5:284041/1‑147 (MQ=255)                                                                                                          acaAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGc                                       <  1:313965/149‑1 (MQ=255)                                                                                                           caAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGc                                       >  8:224141/1‑148 (MQ=255)                                                                                                             aGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAg                                    <  6:13428/149‑1 (MQ=255)                                                                                                                 tGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACg                                >  6:172676/1‑149 (MQ=255)                                                                                                                   ccTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACgg                                                 <  3:23056/130‑1 (MQ=255)                                                                                                                   ccTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACgg                                                 >  4:23056/1‑130 (MQ=255)                                                                                                                       gCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAAc                                 <  4:158102/142‑1 (MQ=255)                                                                                                                       gCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAAc                                 >  3:158102/1‑142 (MQ=255)                                                                                                                       gCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGc                           <  2:122178/148‑1 (MQ=255)                                                                                                                         tGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGcaacaa                                           <  3:176365/130‑1 (MQ=255)                                                                                                                         tGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGcaacaa                                           >  4:176365/1‑130 (MQ=255)                                                                                                                             gcACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGaa                                  >  5:262025/1‑135 (MQ=255)                                                                                                                             gcACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGaa                                  <  6:262025/135‑1 (MQ=255)                                                                                                                               aCCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGgcg                  <  7:224141/149‑1 (MQ=255)                                                                                                                                       aCCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGa          <  7:50148/149‑1 (MQ=255)                                                                                                                                         ccTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATggcgcccagggtgatcaggtgcgccagcaaggcacgcttgtggctggcaggcaggcgatatacccgctgctcgatacgctcgacggtggtgttcggcggggt         <  1:12680‑M2/148‑103 (MQ=255)                                                                                                                                         ccTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAgg                    <  2:147300/137‑1 (MQ=255)                                                                                                                                         ccTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAgg                    >  1:147300/1‑137 (MQ=255)                                                                                                                                          cTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATggcgcccagggtgatcaggtgcgccagcaaggcacgcttgtggctggcaggcaggcgatatacccgctgctcgatacgctcgacggtggtgttcggcggggtga       <  3:183732‑M2/149‑105 (MQ=255)                                                                                                                                           tGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACtt       >  7:177134/1‑148 (MQ=255)                                                                                                                                             ggCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATggcgcccagggtgatcaggtgcgccagcaaggcacgcttgtggctggcaggcaggcgatatacccgctgctcgatacgctcgacggtggtgttcggcggggtgac      >  4:183732‑M2/1‑42 (MQ=255)                                                                                                                                              gcgcCatgcttggttcgggtgaacaccaacacctgttcccaggcgcccagggtgatcaggtgcgccagcaaggcacgcttgtggctggcaggcaggcgatatacccgctgctcgatacgctcgacggtggtgttcggcggggtgacct    <  1:24392‑M1/148‑144 (MQ=255)                                                                                                                                               cgcCatgcttggttcgggtgaacaccaacacctgttcccaggcgcccagggtgatcaggtgcgccagcaaggcacgcttgtggctggcaggcaggcgatatacccgctgctcgatacgctcgacggtggtgttcggcggggtgacctc   >  2:203683‑M1/1‑4 (MQ=255)                                                                                                                                               cgcCatgcttggttcgggtgaacaccaacacctgttcccaggcgcccagggtgatcaggtgcgccagcaaggcacgcttgtggctggcaggcaggcgatatacccgctgctcgatacgctcgacggtggtgttcggcggggtgacctc   >  2:199001‑M1/1‑4 (MQ=255)                                                                                                                                               cgcCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAgg  <  6:255217/149‑1 (MQ=255)                                                                                                                                                  cTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTAc                                                                                       <  4:180390/61‑1 (MQ=255)                                                                                                                                                  cTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTAc                                                                                       >  3:180390/1‑61 (MQ=255)                                                                                                                                                  |                                                                                                                                                  ACCTCGCCGACAAGCTCCTGCACAACCCGGAGCGTATCGAGGTCACCCCGCCGAACACCACCGTCGAGCGTATCGAGCAGCGGGTATATCGCCTGCCTGCCAGCCACAAGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAAGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGG  >  NC_002947/5673356‑5673646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.