New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5777084 =	59 (1.170)	3 (0.060)	3/246	NT	5.2%	coding (1401/1698 nt)	betA‑II	choline dehydrogenase
	?	NC_002947	5777121 =	54 (1.120)					coding (1438/1698 nt)	betA‑II	choline dehydrogenase

CACCGAGCAGGACTGGCAGGAATTCCGTGACGGCATTCGTCTGACCCGTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGCCGCTGATCATCACC  >  NC_002947/5776937‑5777228                                                                                                                                                    |                                                                                                                                                 cACCGAGCAGGACTGGCAGGAATTCCGTGACGGCATTCGTCTGACCCGTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCcgc                                                                                                                                                  <  2:276063/148‑1 (MQ=255)  ttctcggcgatcatgatcgtggtggcgttgaggttgccggtgatgatcagcggcatgatcgaggcatcgaccacgcgcaggcccttcatgccgtgcacgcggccttcaccatcgaccactgccatgtcgtcggtgcccatcttgcac                                                                                                                                                  <  5:70626‑M1/1‑1 (MQ=255)    ctcggcgatcatgatcgtggtggcgttgaggttgccgttgatgatcagcggcatgatcgaggcatcgaccacgcgcaggcccttcatgccgtgcacgcggccttcaccatcgaccactgccatgtcgtcggtgcccatcttgcaCGAg                                                                                                                                               >  7:234488‑M1/145‑148 (MQ=255)    ctcggcgatcatgatcgtggtggcgttgaggttgccggtgatgatcagcggcatgatcgaggcatcgaccacgcgcaggcccttcatgccgtgcacgcggccttcaccatcgaccactgccatgtcgtcggtgcccatcttgcaCGa                                                                                                                                                >  5:227763‑M1/145‑147 (MQ=255)    cGAGCAGGACTGGCAGGAATTCCGTGACGGCATTCGTCTGACCCGTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGc                                                                                                                                              <  6:174523/149‑1 (MQ=255)     tcggcgatcatgatcgtggtggcgttgaggttgccggtgatgatcagcggcatgatcgaggcatcgaccacgcgcaggcccttcatgccgtgcacgcggccttcaccatcgaccactgccatgtcgtcggtgcccatcttgcaCGAg                                                                                                                                               <  5:60835‑M1/4‑1 (MQ=255)       ggcgatcatgatcgtggtggcgttgaggttgccggtgatgatcagcggcatgatcgaggcatcgaccacgcgcaggcccttcatgccgtgcacgcggccttcaccatcgaccactgccatgtcgtcggtgcccatcttgcaCGAGCa                                                                                                                                             >  2:1917‑M1/142‑147 (MQ=255)                    gAATTCCGTGACGGCATTCGTCTGACCCGTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCtt                                                                                                                              <  4:106997/149‑1 (MQ=255)                     aaTTCCGTGACGGCATTCGTCTGACCCGTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTc                                                                                                                             >  3:235726/1‑149 (MQ=255)                     aaTTCCGTGACGGCATTCGTCTGACCCGTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTc                                                                                                                             <  4:24708/149‑1 (MQ=255)                         ccGTGACGGCATTCGTCTGACCCGTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCAc                                                                                                                          <  5:148349/148‑1 (MQ=255)                          cGTGACGGCATTCGTCTGACCCGTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCAccc                                                                                                                        <  6:114946/149‑1 (MQ=255)                              aCGGCATTCGTCTGACCCGTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTc                                                                                                                     <  8:141041/148‑1 (MQ=255)                                      ccggtgatgatcagcggcatgatcgaggcatcgaccacgcgcaggcccttcatgccgtgcacgcggccttcaccatcgaccactgccatgtcgtcggtgcccatcttgcaCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGt                                                                                                             >  3:213320‑M1/111‑148 (MQ=255)                                       gTCTGACCCGTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGcc                                                                                                                                <  5:31111/128‑1 (MQ=255)                                       gTCTGACCCGTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGcc                                                                                                                                >  6:31111/1‑128 (MQ=255)                                              ccGTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATgg                                                                                                    <  1:301331/149‑1 (MQ=255)                                                gTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCtt                                                                                                                              >  5:316464/1‑121 (MQ=255)                                                gTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCtt                                                                                                                              <  6:316464/121‑1 (MQ=255)                                                gTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGc                                                                                                  <  1:55723/149‑1 (MQ=255)                                                  gAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCAc                                                                                                >  5:73702/1‑149 (MQ=255)                                                         tGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCgacgac                                                                                         <  3:178953/149‑1 (MQ=255)                                                             ccccccGGCGCTGGACCCGTACCGTGGGCGCGAATGCAGGCCGGTCGCGGACGTGCATACGGTCGAGGAGCGGGACAAGGTCATGGGCGAGCACGGCGTTTCGGCCTTCCTGCCGTCCTGCTCGTGCAAGTTGGGCACGGACGACATgg                                                                                     <  8:22051/145‑1 (MQ=255)                                                                ggcatcgaccacgcgcaggcccttcatgccgtgcacgcggccttcaccatcgaccactgccatgtcgtcggtgcccatcttgcaCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCa                                                                                                          >  8:145472‑M1/85‑125 (MQ=255)                                                                ggcatcgaccacgcgcaggcccttcatgccgtgcacgcggccttcaccatcgaccactgccatgtcgtcggtgcccatcttgcaCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCa                                                                                                          <  7:145472‑M1/41‑1 (MQ=255)                                                                  cGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTc                                                                                                                     <  2:51920/112‑1 (MQ=255)                                                                  cGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTc                                                                                                                     >  1:51920/1‑112 (MQ=255)                                                                   ggCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTgg                                                                               >  5:287453/1‑149 (MQ=255)                                                                        tGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCAAt                                                                          >  1:95175/1‑149 (MQ=255)                                                                          gACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATg                                                                         <  2:92464/148‑1 (MQ=255)                                                                               gTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAg                                                                   >  7:163999/1‑149 (MQ=255)                                                                                tACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAgg                                                                  <  6:73702/149‑1 (MQ=255)                                                                                tACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAgg                                                                  >  6:219331/1‑149 (MQ=255)                                                                                       gCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTg                                                           >  5:108365/1‑149 (MQ=255)                                                                                         cgcgAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTcc                                                                                                                            <  2:13947/82‑1 (MQ=255)                                                                                         cgcgAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTcc                                                                                                                            >  1:13947/1‑82 (MQ=255)                                                                                          gcgAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCCCCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCAc                                                        >  1:49787/1‑149 (MQ=255)                                                                                            gAAATCAGCCCGGGCGCTGCCGTGCAAACCGACGAGCAGCTGGCCAAGTTCATCCGCGAGCACGCCGAAACGGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACGGCGGAGATGGCAGTGGTCGAGGGTGATGGCCTCGTGCTCgg                                                      >  8:226340/1‑149 (MQ=255)                                                                                             aaaTCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGc                                                     <  7:224168/149‑1 (MQ=255)                                                                                             aaaTCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGc                                                     <  5:219331/149‑1 (MQ=255)                                                                                              aaTCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTTGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCa                                                    <  6:287453/149‑1 (MQ=255)                                                                                                   gCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAg                                               >  4:142523/1‑149 (MQ=255)                                                                                                   gCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAg                                               >  8:291837/1‑149 (MQ=255)                                                                                                    cccGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAgg                                              <  1:271612/149‑1 (MQ=255)                                                                                                       gggCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGcc                                           <  8:163999/149‑1 (MQ=255)                                                                                                          cgcTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTgc                                        <  7:255576/149‑1 (MQ=255)                                                                                                           gcTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTg                                                                                                            >  5:192470/1‑80 (MQ=255)                                                                                                           gcTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTg                                                                                                            <  6:192470/80‑1 (MQ=255)                                                                                                            cTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTgcgc                                      >  8:186288/1‑149 (MQ=255)                                                                                                                 gTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGt                                 <  6:190658/149‑1 (MQ=255)                                                                                                                   gCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCg                               <  7:291837/149‑1 (MQ=255)                                                                                                                      aaCCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATg                            <  4:235726/149‑1 (MQ=255)                                                                                                                       aCCTACGAGGATCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACGCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGGGGTCGATGc                           <  7:226340/149‑1 (MQ=255)                                                                                                                         cgacgaGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCt                         >  3:9487/1‑149 (MQ=255)                                                                                                                          gacgaGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTc                        >  1:2011/1‑149 (MQ=255)                                                                                                                                  gcTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCt                         >  7:276642/1‑140 (MQ=255)                                                                                                                                  gcTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCt                         <  8:276642/140‑1 (MQ=255)                                                                                                                                  gcTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATc                    >  3:113261/1‑145 (MQ=255)                                                                                                                                  gcTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATc                    <  4:113261/145‑1 (MQ=255)                                                                                                                                       aCAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCAATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGCCGCTg           <  2:95175/149‑1 (MQ=255)                                                                                                                                         aaGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATTGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGc                <  6:87229/142‑1 (MQ=255)                                                                                                                                         aaGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGc                <  8:9886/142‑1 (MQ=255)                                                                                                                                         aaGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGc                >  7:9886/1‑142 (MQ=255)                                                                                                                                         aaGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGCCGCTGat         >  6:32203/1‑149 (MQ=255)                                                                                                                                         aaGTTCATACGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGACGATGCCTCGATCATGccacatcg         >  5:87229/1‑143 (MQ=255)                                                                                                                                           gTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGCCGCTGatca       >  5:57932/1‑149 (MQ=255)                                                                                                                                           gTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGCCGCTGatca       >  2:21470/1‑149 (MQ=255)                                                                                                                                              cATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGCCg              <  5:171217/139‑1 (MQ=255)                                                                                                                                              cATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGCCg              >  6:171217/1‑139 (MQ=255)                                                                                                                                                tCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGCCGCTGATCATCAcc  >  6:70626/1‑149 (MQ=255)                                                                                                                                                 ccGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGCCGCTGa          >  7:39169/1‑140 (MQ=255)                                                                                                                                                 ccGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGCCGCTGa          <  8:39169/140‑1 (MQ=255)                                                                                                                                                    CGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGTGTGCACGGCATGAAGGGCCTGCGCGTGGTCGAt                             <  8:280154‑M1/118‑1 (MQ=255)                                                                                                                                                    CGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGTGTGCACGGCATGAAGGGCCTGCGCGTGGTCGAt                             >  7:280154‑M1/1‑118 (MQ=255)                                                                                                                                                    |                                                                                                                                                 CACCGAGCAGGACTGGCAGGAATTCCGTGACGGCATTCGTCTGACCCGTGAAATCATGGCCCAGCCGGCGCTGGACCCGTACCGTGGCCGCGAAATCAGCCCGGGCGCTGACGTGCAAACCGACGAGCAGCTGGACAAGTTCATCCGCGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCAGTGGTCGATGGTGAAGGCCGCGTGCACGGCATGAAGGGCCTGCGCGTGGTCGATGCCTCGATCATGCCGCTGATCATCACC  >  NC_002947/5776937‑5777228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.