New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5876984 =29 (0.580)5 (0.120) 5/210 NT 18.3% intergenic (+6/+99) rpiA/PP_5151 ribose‑5‑phosphate isomerase A/hypothetical protein
?NC_002947 5877066 = 21 (0.510)intergenic (+88/+17) rpiA/PP_5151 ribose‑5‑phosphate isomerase A/hypothetical protein

GCAGATCACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGAC  >  NC_002947/5876837‑5877130
                                                                                                                                                   |                                                                                                                                                   
gcgcaagggtttccaggggttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccaattacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgt                                                                                                                                                     >  5:3276‑M1/148‑148 (MQ=255)
 gcaagggtttccaggggttgcaggcgagcggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTc                                                                                                                                                   <  1:14231‑M1/3‑1 (MQ=255)
  gcaagggtttccaggggttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTcg                                                                                                                                                  <  7:94103‑M1/4‑1 (MQ=255)
    aagggtttccaggggttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTcgcg                                                                                                                                                >  6:232311‑M1/144‑149 (MQ=255)
     tCACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGG                                                                                                                                               >  8:94103‑M1/1‑149 (MQ=255)
        gtttccaggggttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGt                                                                                                                                             <  3:237278‑M1/9‑1 (MQ=255)
            cccGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAac                                                                                                                                        >  8:123726‑M1/1‑147 (MQ=255)
             ccGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCC                                                                                                                                       <  8:227468‑M1/149‑1 (MQ=255)
             caggggttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAAcc                                                                                                                                        >  3:26682‑M1/135‑148 (MQ=255)
                   ttgcaggcgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCt                                                                                                                                 >  4:133518‑M1/129‑149 (MQ=255)
                      cTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTAC                                                                                                                               >  8:216667‑M1/1‑148 (MQ=255)
                       tGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTAC                                                                                                                               >  5:152591‑M1/1‑147 (MQ=255)
                        ggAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGG                                                                                                                                              >  5:221801‑M1/1‑131 (MQ=255)
                        ggAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGG                                                                                                                                              <  6:221801‑M1/131‑1 (MQ=255)
                         gAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAg                                                                                                                            <  8:168735/148‑1 (MQ=255)
                         gAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAg                                                                                                                            <  5:87679/148‑1 (MQ=255)
                          cgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCgg                                                                                                                                               >  4:26481‑M1/122‑128 (MQ=255)
                          cgacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCgg                                                                                                                                               <  3:26481‑M1/7‑1 (MQ=255)
                           gacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTa                                                                                                                                >  4:182104‑M1/121‑142 (MQ=255)
                           gacggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTa                                                                                                                                <  3:182104‑M1/22‑1 (MQ=255)
                              ggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAAccc                                                                                                                                       >  1:246059‑M1/118‑132 (MQ=255)
                              ggtgccgcaggcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAAccc                                                                                                                                       <  2:246059‑M1/15‑1 (MQ=255)
                              gcAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTAccc                                                                                                                      >  4:279875/1‑149 (MQ=255)
                               cAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgc                                                                                                                      >  8:283930‑M1/1‑140 (MQ=255)
                                aGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCa                                                                                                                    >  2:205903/1‑149 (MQ=255)
                                   tCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacgg                                                                                                                 >  3:109626‑M1/1‑136 (MQ=255)
                                      aCGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGcc                                                                                                              <  2:300398/149‑1 (MQ=255)
                                        gcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTa                                                                                                                                <  2:140069‑M1/22‑1 (MQ=255)
                                        gcggaggggattgcgatggatgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTa                                                                                                                                >  1:140069‑M1/108‑129 (MQ=255)
                                        gCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTg                                                                                                            >  1:221092/1‑149 (MQ=255)
                                        gCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCCCGACTACAAAGTTCCCCACCGGccgg                                                                                                            >  4:203732/1‑147 (MQ=255)
                                            tcgtcgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAAc                                                                                                        <  7:153239/149‑1 (MQ=255)
                                                 ggCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTg                                                                                                    <  5:1695/148‑1 (MQ=255)
                                                  gCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGc                                                                                                  <  1:205903/149‑1 (MQ=255)
                                                       gtgACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATcc                                                                                             >  6:3244/1‑149 (MQ=255)
                                                        tgACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATccc                                                                                            >  7:149257/1‑149 (MQ=255)
                                                          aCCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCt                                                                                           >  7:69596‑M2/1‑147 (MQ=255)
                                                           ccAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgt                                                                                         >  5:3244‑M2/1‑146 (MQ=255)
                                                            tgaagcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTg                                                                                          <  3:103728‑M1/60‑1 (MQ=255)
                                                            cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgta                                                                                        >  2:221092‑M2/1‑145 (MQ=255)
                                                            cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgta                                                                                        >  6:152591‑M2/1‑145 (MQ=255)
                                                             aaCGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtag                                                                                       <  5:312845‑M1/149‑40 (MQ=255)
                                                             aaCGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAg                                                                                                                            >  1:287140/1‑112 (MQ=255)
                                                             aaCGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAg                                                                                                                            <  2:287140/112‑1 (MQ=255)
                                                               agcggggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGa                                                                                     >  7:34395‑M1/85‑149 (MQ=255)
                                                                  ccTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcg                                                                                  <  7:283930‑M1/149‑45 (MQ=255)
                                                                   gggaccatttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCgg                                                                                >  4:103728‑M1/81‑149 (MQ=255)
                                                                   cTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgg                                                                                 <  4:109626‑M1/149‑46 (MQ=255)
                                                                        catttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAAcc                                                                                                       >  6:41661‑M1/76‑122 (MQ=255)
                                                                        catttacctggtcagtgagccgaacctgttctatgtgttcaagcagccgactgactgatcgcctgtcagggcctgTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAAcc                                                                                                       <  5:41661‑M1/47‑1 (MQ=255)
                                                                         gcggcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCCCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCtgtaggagcgggtttac                                                                           <  8:246514‑M2/149‑18 (MQ=255)
                                                                             cgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGTCCTGGAACCGTGGCGATCCCtgtaggagcgggtttacccgc                                                                       >  8:149257‑M2/1‑128 (MQ=255)
                                                                                 gccggcGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCAACAAGGTACCCCACCGGCCAGGAACCGTGGCGCTCCCggtaggagcgggtttacccgcgaa                                                                    <  8:56003‑M2/148‑25 (MQ=255)
                                                                                  ccggcGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAACGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACa                                                                 <  3:203732/149‑1 (MQ=255)
                                                                                    ggcggATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAgg                                                               <  7:216667/149‑1 (MQ=255)
                                                                                        gATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCt                                                           <  7:123726/149‑1 (MQ=255)
                                                                                                 ctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCAGGAACCGTGGCGATCCCTGTAGGAGCGGGGTTACCCGCGCACAGGCCCTGACAGGCGa                                                  >  8:243068/1‑149 (MQ=255)
                                                                                                      gggCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGC                                                                                                                                     >  6:58703‑M1/1‑62 (MQ=255)
                                                                                                      gggCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGC                                                                                                                                     <  5:58703‑M1/62‑1 (MQ=255)
                                                                                                      ggccACCGCTGAAGGCGTGAATCGCCTGAAGGCCGAGTAAACCCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGCACCCGTGGCGATCCCTGTAGCAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagt                                             <  3:7681/146‑1 (MQ=255)
                                                                                                       ggCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagt                                             <  7:251926/148‑1 (MQ=255)
                                                                                                          aCCGCTGAAGGCGTGAAGCGCCTGAATGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATcagtcagt                                         <  5:310648/149‑1 (MQ=255)
                                                                                                                 aaGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgctgc                                  <  5:288304/149‑1 (MQ=255)
                                                                                                                 aaGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCCCAACAAAAAAATAAACCACCCCCCAGGAACCCTTGCGATACCAGTAGGAGACGGGTTTAACCCCAACACGCCCAGACACGCGAACAGTAAGTAGgcggg                                  >  4:146851/1‑146 (MQ=255)
                                                                                                                      gTGAAGAGCCTGAAGTCCGAGTAAACCCCTTCGCGGGTAAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGTAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGaa                             <  8:38727/149‑1 (MQ=255)
                                                                                                                                  aaGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACa                  <  3:106434/148‑1 (MQ=255)
                                                                                                                                  aaGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAg                 <  7:56003/149‑1 (MQ=255)
                                                                                                                                       cGAGTAAAACCCTTCGCGGGTAAACCCCCTCCAACAATGTAACCCACCCGCCGGGCAACGTGGCGATCCCGGTAAGAGCCGGGTTAACCGCGCACACGCCCAGAAACGCGAAAATTCAGTCGGCTGCTTGAACACATAGAAAAGGttag            >  6:141332/1‑147 (MQ=255)
                                                                                                                                       cGAGTAAAACCCTTCGCGGGTAAACCCCCACCAAAAAAGTACCCCCCCCGCCTGGAACCCTGGCGAACCCACGAGGACCCGGGTTACCCCCGCACACCCCCAGCCAGGCGATCAGTCACTCGGCGGCTTGAAAACAAATAACACGttag            >  8:147698/1‑147 (MQ=255)
                                                                                                                                         aGTAAAACCCTTCGCGGGTAAAACCCCTCCAACAAAGTACCCCACCGGCCAGGAACCCAGGCGATCCCAGTAGGCGCGGGTTTAACCGCGAACAAGCCCGGACAGGCGATCAGTCACTCGGCGGCTTGAACACAAATAACAGGTTAGGc          >  2:239682/1‑149 (MQ=255)
                                                                                                                                                 ccTTCGCGGGTAAACCCCCGACAAAAAAGTACCCCCCCCGCCTGGAACCGTGGCGCTACCGGGAGGAGCGGGGTTAACCCCGAACAGGCCCTGACAGGCGCTCAGTCAGTAGGCTGGTTGAACACATAAAACACGGTAGGCTCACAGAc  >  2:14231/1‑149 (MQ=255)
                                                                                                                                                   ttCGCGGGTAAACCCGCTCCTACCgggagcgccacggttcctggccggtggggtaccttgttggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggc  <  8:56003‑M1/148‑125 (MQ=255)
                                                                                                                                                   TTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCgg                                                                                <  1:146851‑M1/69‑1 (MQ=255)
                                                                                                                                                   TTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCgg                                                                                >  2:146851‑M1/1‑69 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GCAGATCACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGAC  >  NC_002947/5876837‑5877130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.