| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2652179 | 50 (0.990) | 3 (0.060) | 3/250 | NT | 5.5% | coding (239/1113 nt) | aroF‑I | tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| ? | NC_002947 | = 2652217 | 54 (1.110) | coding (201/1113 nt) | aroF‑I | tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase | |||||
CGGTGGTGCGCGGCTTTTCGAAGTACACGCGCATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAGGGGTGATCAGGGTCTCGTTGGAGGCAACGTTCAAGTCAT > NC_002947/2652075‑2652362 | cGGTGGTGCGCGGCTTTTCGAAGTACACGCGCATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGa < 3:159868/149‑1 (MQ=255) tggtgCGCGGCTTTTCGAAGTACACGCGTATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATgg > 5:329378/1‑149 (MQ=255) tgCGCGGCTTTTCGAAGTACACGCGCATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGAAGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTcc < 5:37280/149‑1 (MQ=255) cgcgGCTTTTCGAAGTACACGCGTATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCtt < 6:329378/149‑1 (MQ=255) cgcgGCTTTTCGAAGTACACGCGCATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCtt > 5:272184/1‑149 (MQ=255) cgcgGCTTTTCGAAGTACACGCGCATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCt < 8:212896/148‑1 (MQ=255) ggCTTTTCGAAGTACACGCGCATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGcc > 1:40884/1‑149 (MQ=255) cGAAGTACACGCGCATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTc > 5:192208/1‑136 (MQ=255) cGAAGTACACGCGCATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTc < 6:192208/136‑1 (MQ=255) cGAAGTACACGCGCATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCgag > 3:40413/1‑148 (MQ=255) aGTACACGCGCATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAata > 6:184381/1‑149 (MQ=255) gTACACGCGCATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAatat > 8:166210/1‑149 (MQ=255) acGCGCATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTgcg < 6:272184/149‑1 (MQ=255) gACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACt > 7:69398/1‑148 (MQ=255) acTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCAccagc > 1:48760/1‑143 (MQ=255) ttcttcGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTg > 6:12400/1‑147 (MQ=255) ttcttcGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTg > 6:269669/1‑147 (MQ=255) tcttaGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAg > 7:79275/1‑149 (MQ=255) cGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAgg < 7:166210/146‑1 (MQ=255) gCCAGCACTTTCAGGCGCTCGGCGTATTCGTTGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCtt < 1:68757/149‑1 (MQ=255) aCTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCt > 7:110682/1‑149 (MQ=255) tttCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCt > 5:116491/1‑147 (MQ=255) gcgcTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCGTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGa > 8:175404/1‑149 (MQ=255) gcTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGCCCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGTCCTTGGCGCTGAGGCGGagt > 4:43737/1‑147 (MQ=255) gcTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGAtt > 4:278930/1‑149 (MQ=255) tCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTc > 3:235528/1‑149 (MQ=255) ggCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTc < 4:305224/147‑1 (MQ=255) ggCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTc < 4:40413/147‑1 (MQ=255) cGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCcttc < 4:235528/149‑1 (MQ=255) cGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCcttc < 8:69398/149‑1 (MQ=255) gTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCa < 2:316838/110‑1 (MQ=255) gTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCa > 1:316838/1‑110 (MQ=255) tATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCcttctt < 8:79275/149‑1 (MQ=255) tGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACaggcagcccacgaatacgccgagcgcctgaaagtgctggccgaagaagtgtccgatacgctgtacctggtcatgcgcgtgtacttcgaaaagccgcgcaccaccgt < 1:203794‑M2/149‑107 (MQ=255) ccTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAg < 5:269669/147‑1 (MQ=255) ccTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGAGCAGCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATAAggg > 1:61090/1‑149 (MQ=255) ccTTGATGTCGTGGATGGAGCAAGGGCCGACAACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAggg > 3:91820/1‑149 (MQ=255) gATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAGGGGTg < 8:110682/148‑1 (MQ=255) gATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAGGGGTGa > 4:280138/1‑149 (MQ=255) cGTGGATGGAGCAAGGGCCGACCACGACGAACaggcagcccacgaatacgccgagcgcctgaaagtgctggccgaagaagtgtccgatacgctgtacctgg < 1:123606‑M2/101‑70 (MQ=255) cGTGGATGGAGCAAGGGCCGACCACGACGAACaggcagcccacgaatacgccgagcgcctgaaagtgctggccgaagaagtgtccgatacgctgtacctgg > 2:123606‑M2/1‑32 (MQ=255) tggatggaGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCct > 4:30290/1‑121 (MQ=255) tggatggaGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCct < 3:30290/121‑1 (MQ=255) atggaGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAgg < 3:253819/108‑1 (MQ=255) atggaGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAgg > 4:253819/1‑108 (MQ=255) atggaGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAGGGGTGATCAGGGtctc < 2:40884/149‑1 (MQ=255) ggaGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCATGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAgggg < 4:239378/134‑1 (MQ=255) ggaGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCATGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAgggg > 3:239378/1‑134 (MQ=255) gCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCctt < 4:122628/114‑1 (MQ=255) gCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCctt > 3:122628/1‑114 (MQ=255) cAAGGGCCGACGACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAGGGGTGATCAGGGTCTCGTTGGa < 4:91820/149‑1 (MQ=255) aaGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCAGCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAGGGGTGAGCAGGGTCTCGTTGGAg < 3:43737/149‑1 (MQ=255) gggCCGAACACGACGAACATGCGATGGTCCTTGCCGTCGACAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAGGGGTTATCAGGGTCTCGTTGGAg < 2:61090/147‑1 (MQ=255) ccGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAGGGGTGATCAGGGTCTCGTTGGAGGCAAc < 5:12400/149‑1 (MQ=255) gacgaACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAGGGGTGATCAGGGTCTCGTTg > 6:230742/1‑133 (MQ=255) gacgaACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAGGGGTGATCAGGGTCTCGTTg < 5:230742/133‑1 (MQ=255) gacgaACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAGGGGTGATCAGGGTCTCGTTGGAGGCAACGTTCAAg > 5:195184/1‑148 (MQ=255) acgaACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCcttctt < 6:75383/101‑1 (MQ=255) acgaACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCcttctt > 5:75383/1‑101 (MQ=255) gaACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAGGGGTGATCAGGGTCTCGTTGGAGGCAACGTTCAAGTCat < 3:278930/149‑1 (MQ=255) | CGGTGGTGCGCGGCTTTTCGAAGTACACGCGCATGACCAGGTACAGCGTATCGGACACTTCTTCGGCCAGCACTTTCAGGCGCTCGGCGTATTCGTGGGCTGCCTTGATGTCGTGGATGGAGCAAGGGCCGACCACGACGAACAGGCGATGGTCCTTGCCGTCGAGAATATTGCGCACCACTTCACGGCCGGCAGTCACGGTCTGCAGGGCCTTGGCGCTGAGGGGGATTTCCTTCTTGAGCTGATCAGGGGTGATCAGGGTCTCGTTGGAGGCAACGTTCAAGTCAT > NC_002947/2652075‑2652362 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |