New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3794274 =	36 (0.710)	3 (0.060)	3/246	NT	8.4%	coding (249/1191 nt)	PP_3355	beta‑ketothiolase
	?	NC_002947	3794323 =	31 (0.650)					coding (200/1191 nt)	PP_3355	beta‑ketothiolase

ATCGGATTGCGCGACATCGACTCCGCGCCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGG  >  NC_002947/3794179‑3794470                                                                                                                                                 |                                                                                                                                                    aTCGGATTGCGCGACATCGACTCCGCGCCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCcaca                                                                                                                                                 <  4:250400/149‑1 (MQ=255)  tCGGATTGCGCGACATCGACTCCGCGCCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAg                                                                                                                                                >  5:112498/1‑149 (MQ=255)    ggATTGCGCGACATCGACTCCGCGCCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGt                                                                                                                                               <  8:115073/148‑1 (MQ=255)    ggATTGCGCGACATCGACTCCGCGCCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGt                                                                                                                                               <  1:296524/148‑1 (MQ=255)    ggATTGCGCGACATCGACTCCGCGCCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTa                                                                                                                                              <  4:279166/149‑1 (MQ=255)            cgACATCGACTCCGCGCCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGa                                                                                                                                      <  8:273579/149‑1 (MQ=255)                 tCGACTCCGCGCCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATgg                                                                                                                                 >  2:30999/1‑149 (MQ=255)                   gACTCCGCGCCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCg                                                                                                                               >  8:155773/1‑149 (MQ=255)                      tCCGCGCCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTgg                                                                                                                            >  4:212336/1‑149 (MQ=255)                       ccGCGCCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTgg                                                                                                                            >  5:329049/1‑148 (MQ=255)                        cgcgCTCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTgg                                                                                                                            <  4:110266/147‑1 (MQ=255)                        cgcgCCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGgca                                                                                                                          <  3:45133/149‑1 (MQ=255)                         gcgcCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGgcag                                                                                                                         <  6:112498/149‑1 (MQ=255)                           gcCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGgc                                                                                                                           >  6:271516/1‑145 (MQ=255)                           gcCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGgc                                                                                                                           <  5:271516/145‑1 (MQ=255)                                     aGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTc                                                                                                             >  6:295345/1‑149 (MQ=255)                                         ccTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAg                                                                                                         <  6:11029/149‑1 (MQ=255)                                            ggcgggcgCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTg                                                                                                      >  4:309041/1‑149 (MQ=255)                                             gcgggcgCCACTGCGCAGCTGTTCACCGGCCTGACGCAACCGTTCAAGGCCCGTGCCACAGAAGCGCTGCCCCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGCAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTgg                                                                                                     <  7:53707/149‑1 (MQ=255)                                                           gcAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCAtgctg                                                                                       >  2:65759/1‑149 (MQ=255)                                                                     aCCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGgcagc                                                                                                                        <  1:148632/106‑1 (MQ=255)                                                                     aCCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGgcagc                                                                                                                        >  2:148632/1‑106 (MQ=255)                                                                       cGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGcaca                                                                           <  5:163662/149‑1 (MQ=255)                                                                                         cAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAg                                                           >  4:269444/1‑147 (MQ=255)                                                                                         cAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAg                                                           <  3:269444/147‑1 (MQ=255)                                                                                           aGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGggc                                                       <  1:46080/149‑1 (MQ=255)                                                                                              cccGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGggcggc                                                    <  3:309041/149‑1 (MQ=255)                                                                                                 gtgccgcaggcggtaccggcactggcggtgcagcgcatctgtggcacgCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGggcgg                                                     <  5:202035‑M2/97‑1 (MQ=255)                                                                                                 gtgccgcaggcggtaccggcactggcggtgcagcgcatctgtggcacgCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGggcgg                                                     >  6:202035‑M2/49‑145 (MQ=255)                                                                                                    ccgcaggcggtaccggcactggcggtgcagcgcatctgtggcacgCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTg                                               >  5:283083‑M2/46‑148 (MQ=255)                                                                                                      acaGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCAc                                            >  3:40089/1‑149 (MQ=255)                                                                                                                  cACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACcg                                >  1:189859/1‑149 (MQ=255)                                                                                                                          gTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCAc                                  <  4:74087/139‑1 (MQ=255)                                                                                                                          gTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCAc                                  >  3:74087/1‑139 (MQ=255)                                                                                                                                   ccGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATg               <  3:212336/149‑1 (MQ=255)                                                                                                                                      ccTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGcc             >  4:83861/1‑148 (MQ=255)                                                                                                                                      ccTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGcc             >  2:108162/1‑148 (MQ=255)                                                                                                                                       cTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGcc             >  8:126849/1‑147 (MQ=255)                                                                                                                                       cTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCa           <  7:155773/149‑1 (MQ=255)                                                                                                                                        tGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCggccggcc                     <  4:112409/138‑1 (MQ=255)                                                                                                                                        tGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCggccggcc                     >  3:112409/1‑138 (MQ=255)                                                                                                                                          cGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGt        <  6:39398/149‑1 (MQ=255)                                                                                                                                           ggcacgCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTc       >  2:314885‑M2/7‑149 (MQ=255)                                                                                                                                             cacgCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGa     >  8:203939‑M2/5‑149 (MQ=255)                                                                                                                                                gCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATgg  <  4:220136‑M2/148‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                    ATCGGATTGCGCGACATCGACTCCGCGCCCACGCACAGCACCTGGCGGGCGCCACTGCGCAGCTGTTCACCGGCCTGACGCAACAGTTCAAGGCCCGTGCCACAGATGCGCTGCACCGCCAGTGCCGGTACCGCCTGCGGCACGCCACAGTAGAGGCCGACATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGG  >  NC_002947/3794179‑3794470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.