New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3893029 =54 (1.070)3 (0.060) 3/244 NT 5.6% coding (393/888 nt) rarD chloramphenicol‑sensitive protein
?NC_002947 3893061 = 50 (1.050)coding (425/888 nt) rarD chloramphenicol‑sensitive protein

CCCTGCATGGGCGCAGCCTGGAAGTGTCGATGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGCCTGCTGCTGCCGTGGGCGCTGTAC  >  NC_002947/3892914‑3893209
                                                                                                                                                     |                                                                                                                                                    
cccTGCATGGGCGCAGCCTGGAAGTGTCGATGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAg                                                                                                                                                     >  8:304908/1‑149 (MQ=255)
cccTGCATGGGCGCAGCCTGGAAGTGTCGATGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAg                                                                                                                                                     <  8:233554/149‑1 (MQ=255)
cccTGCATGGGCGCAGCCTGGAAGTGTCGATGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAg                                                                                                                                                     <  7:304908/149‑1 (MQ=255)
   cacaggccgcccaggttgtcggtgcggcagcgtcggcgcagcacgaagtagaccgggtagccgatcgttaccagcagggtttcccaggcaaaactgccattttggtacagctCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTg                                                                                                                                                  >  5:228757‑M1/113‑149 (MQ=255)
           cgcAGCCTGGAAGTGTCGATGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGACCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCaaaa                                                                                                                                          >  1:101841/1‑149 (MQ=255)
           cgcAGCCTGGAAGTGTCGATGGGTTACTTCCTGCTGCCACTGGCCAAGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCaaaa                                                                                                                                          <  1:32866/149‑1 (MQ=255)
            tctgCCTGTCAGTGTCGATGGGTTACTTGCTGCTGCCTCTGGCCTTGGTCCTGACCGGGCGGCTGTTATATGGCGAGCGGCTGTCACGCCTGCAGACGTTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAAt                                                                                                                                         <  2:286302/146‑1 (MQ=255)
              aGCCTGGAAGTGTCGATGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATgg                                                                                                                                       >  8:12552/1‑149 (MQ=255)
                ccTGGAAGTGTCGATGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCt                                                                                                                                                   >  7:230847/1‑135 (MQ=255)
                ccTGGAAGTGTCGATGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCt                                                                                                                                                   <  8:230847/135‑1 (MQ=255)
                ccTGGAAGTGTCGATGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATgg                                                                                                                                       >  4:289476/1‑147 (MQ=255)
                     aaGTGTCGATGGCTTACTTCCTGCAGCCACTTGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGtttt                                                                                                                                <  8:102873/149‑1 (MQ=255)
                          tCGATGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCt                                                                                                                            <  2:88652/148‑1 (MQ=255)
                          gtgcggcagcgtcggcgcagcacgaagtagaccgggtagccgatcgttaccagcagggtttcccaggcaaaactgccattttggtacagctcgtggcctgcgccgcactgggcgtgggccacgAGCTGTACCAAAATGGCa                                                                                                                                     >  2:291084‑M2/124‑141 (MQ=255)
                          gtgcggcagcgtcggcgcagcacgaagtagaccgggtagccgatcgttaccagcagggtttcccaggcaaaactgccattttggtacagctcgtggcctgcgccgcactgggcgtgggccacgAGCTGTACCAAAATGGCa                                                                                                                                     <  1:291084‑M2/18‑1 (MQ=255)
                             aTGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTggg                                                                                                                         >  5:307104/1‑148 (MQ=255)
                              tGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGa                                                                                                                        >  5:149705/1‑148 (MQ=255)
                              tGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGa                                                                                                                        >  2:201959/1‑148 (MQ=255)
                                gggtACTTCGTGCTGCCTCTGGCCATGGTCCTGACCGGGCGGGTGGGATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGGCGCACTGGGCGTGGGCCACGAGCTGTACAAAAATGGCAGTTTTGCCTGGTAAAc                                                                                                                     <  2:237164/146‑1 (MQ=255)
                                        ccTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCctgct                                                                                                               <  3:289476/147‑1 (MQ=255)
                                            ctgcCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTaa                                                                                                          <  7:213616/148‑1 (MQ=255)
                                               ccACTAGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGAt                                                                                                      >  5:119603/1‑149 (MQ=255)
                                                cACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATc                                                                                                     >  3:105002/1‑149 (MQ=255)
                                                cACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATc                                                                                                     <  7:12552/149‑1 (MQ=255)
                                                 aCTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCg                                                                                                    >  7:193119/1‑149 (MQ=255)
                                                  cTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCgg                                                                                                   <  1:113727/149‑1 (MQ=255)
                                                  cTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCg                                                                                                    <  1:153160/148‑1 (MQ=255)
                                                  cTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCg                                                                                                    >  2:153160/1‑148 (MQ=255)
                                                     gCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTa                                                                                                >  2:276116/1‑149 (MQ=255)
                                                                  ccGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCATGCTGGTAACGATCGGCTACCCGGTCTACTTc                                                                                   <  1:201959/149‑1 (MQ=255)
                                                                   cGGGGGGCTGGTTTATGGCGAGCGGGTGTCACGCCTGCAGACTGTAGCCGTGGCCGGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCg                                                                                  <  3:230814/149‑1 (MQ=255)
                                                                   cGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCg                                                                                  <  4:105002/149‑1 (MQ=255)
                                                                   cGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCg                                                                                  >  7:118262/1‑149 (MQ=255)
                                                                             gTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTgcgc                                                                          <  6:149705/147‑1 (MQ=255)
                                                                                tatGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGAc                                                                      <  6:307104/148‑1 (MQ=255)
                                                                                  tGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCt                                                                   >  4:22171/1‑149 (MQ=255)
                                                                                    gCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGTAACCCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGc                                                                 <  1:245347/149‑1 (MQ=255)
                                                                                    gCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTg                                                                  <  8:131982/148‑1 (MQ=255)
                                                                                    gCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTg                                                                  >  7:131982/1‑148 (MQ=255)
                                                                                      gAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCg                                                               >  2:159535/1‑149 (MQ=255)
                                                                                       aGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCg                                                               >  5:275209/1‑148 (MQ=255)
                                                                                          ggCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGAACCAAAATGGAAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCAcc                                                           >  1:5522/1‑149 (MQ=255)
                                                                                               tCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACaa                                                      >  7:10100/1‑149 (MQ=255)
                                                                                                 tgccattttggtacagctCGTGGCCCACGCCCAGTGCGGCGCAGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCAc                                                            >  2:291084‑M1/19‑141 (MQ=255)
                                                                                                 tgccattttggtacagctCGTGGCCCACGCCCAGTGCGGCGCAGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCAc                                                            <  1:291084‑M1/123‑1 (MQ=255)
                                                                                                   gCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGTAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGGTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCt                                                   >  1:237310/1‑149 (MQ=255)
                                                                                                         aGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGggcggc                                            <  1:138861/149‑1 (MQ=255)
                                                                                                           aCGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCt                                          >  8:219247/1‑149 (MQ=255)
                                                                                                             ggTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCtgt                                        >  4:294981/1‑149 (MQ=255)
                                                                                                               ttgCCGTGGCCTGCGCCGCACTGGTCGTGGGCCAAGAGCTGTACCAAAATGGGATTTTTGCCTGGGAAACCCTGCTGTTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTTGGCTGCCTgtgg                                      <  2:5522/147‑1 (MQ=255)
                                                                                                               tAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTgtgg                                      <  6:119603/149‑1 (MQ=255)
                                                                                                                cagctcgtggcccacgcccagtgcggcgcaggccacgAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCtgtg                                       >  5:228757‑M2/38‑149 (MQ=255)
                                                                                                                 gCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTgtggt                                     <  1:276116/148‑1 (MQ=255)
                                                                                                                    GTGGCCTGCGCCGCAGTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTAGTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGa                                 >  6:275209‑M1/1‑149 (MQ=255)
                                                                                                                      GGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACa                               <  3:46399‑M1/149‑1 (MQ=255)
                                                                                                                            cgccgcACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGcc                         <  1:159535/149‑1 (MQ=255)
                                                                                                                              ccgcACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGCctg                       <  7:219247/149‑1 (MQ=255)
                                                                                                                              ccgcACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGCctg                       >  2:118026/1‑149 (MQ=255)
                                                                                                                                 cACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTc                                                                                         <  4:181179/80‑1 (MQ=255)
                                                                                                                                    tGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGCctgctgctg                 >  6:128510/1‑149 (MQ=255)
                                                                                                                                     gggCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGCCtgctgctgc                >  5:94510/1‑149 (MQ=255)
                                                                                                                                       ggCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGgtgt                                   >  6:223955/1‑129 (MQ=255)
                                                                                                                                       ggCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGgtgt                                   <  5:223955/129‑1 (MQ=255)
                                                                                                                                         cGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGCCTGCTGCTGCCGt             <  5:128510/149‑1 (MQ=255)
                                                                                                                                            gggCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGCCTGCTGCTGCCGTagg          <  6:94510/149‑1 (MQ=255)
                                                                                                                                                ccacgAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGCCTGCTGCTGCCGTGGgcgc       >  8:95565‑M2/6‑149 (MQ=255)
                                                                                                                                                  acgAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGCCTGCTGCTGCCGTGGGCGCTg     <  7:95565‑M2/146‑1 (MQ=255)
                                                                                                                                                  acgAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGCCTGCTGCTGCCGTGGGCGCTg     <  8:118262‑M2/146‑1 (MQ=255)
                                                                                                                                                    gAGCTGTACCAACCTGGCAGTTTTGCCTGGGAACCCCGGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGCCTGCTGCTGCCGTGGGCGCTGTa   <  4:46399‑M2/148‑1 (MQ=255)
                                                                                                                                                     aGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGCCTGCTGCTGCCGTGGGCGCTGTAc  <  2:101841/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CCCTGCATGGGCGCAGCCTGGAAGTGTCGATGGGTTACTTCCTGCTGCCACTGGCCATGGTCCTGACCGGGCGGCTGGTATATGGCGAGCGGCTGTCACGCCTGCAGACGGTAGCCGTGGCCTGCGCCGCACTGGGCGTGGGCCACGAGCTGTACCAAAATGGCAGTTTTGCCTGGGAAACCCTGCTGGTAACGATCGGCTACCCGGTCTACTTCGTGCTGCGCCGACGCTGCCGCACCGACAACCTGGGCGGCCTGTGGTGTGACATGTGCCTGCTGCTGCCGTGGGCGCTGTAC  >  NC_002947/3892914‑3893209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.