New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4086293 =	64 (1.270)	3 (0.060)	3/244	NT	5.3%	coding (992/1245 nt)	amaD	D‑lysine oxidase
	?	NC_002947	4086405 =	46 (0.970)					coding (1104/1245 nt)	amaD	D‑lysine oxidase

CTGGCAACCAGATCCAGTTGGGCCGCTGCGAGGCCTTGGCGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCGCGCCTTACAGCGCGACCCGTTTCGACTGAAC  >  NC_002947/4086257‑4086548                                                                                                                                                      |                                                                                                                                                tgatgggcatggccgaagttgaaccacagccctgggTGGCGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCAc                                                                                                                                                 >  8:135817‑M1/37‑149 (MQ=255)    gCAACCAGATCCAGTTGGGCCGCTGCGAGGCCTTGGCGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCAccc                                                                                                                                               <  6:9989/148‑1 (MQ=255)      ggcatggccgaagttgaaccactgccctgggTGGCGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAg                                                                                                                                             >  8:1938‑M1/32‑148 (MQ=255)      atccAGATCCAGTTGGGCAGCTGCTAGGCCTTGGCGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAgg                                                                                                                                            <  6:97814/147‑1 (MQ=255)       aCCAGATCCAGTTGGGCCGCTGCGAGGCCTTGGCGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAggg                                                                                                                                           <  7:220143/149‑1 (MQ=255)          aGATCCAGTTGGGCCGCTGCGAGGCCTTGGCGCGCAAACTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCtg                                                                                                                                        >  1:58565/1‑149 (MQ=255)               cAGTTGGGCCGCTGCGAGGCCTTGGCGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGtt                                                                                                                                   >  8:176610/1‑149 (MQ=255)                aGTTGGGCCGCTGCGAGGCCTTGGCGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGtt                                                                                                                                   >  6:160968/1‑148 (MQ=255)                     ggCCGCTGCGAGGCCTTGGCGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACtt                                                                                                                             >  3:92933/1‑149 (MQ=255)                         gCTGCGAGGCCTTGGCGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGc                                                                                                                         >  8:118971/1‑149 (MQ=255)                          cTGCGAGGCCTTGGCGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGcc                                                                                                                        <  6:13808/149‑1 (MQ=255)                                 gCCTTGGCGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCa                                                                                                                 <  1:97828/149‑1 (MQ=255)                                 ctgggtggcgcggcgccggcccgatcaccgggcgcatgtccggcaggcaggggcggcggcccagccatggcgtgtcgtccagacgatcgccgagggccgggaacagcttgcgcgccaCCCAGGGCAGTGGTTCAACTTCGGCCATGcc                                                                                                                   >  8:1938‑M2/118‑148 (MQ=255)                                     gtggcgcggcgccggcccgatcaccgggcgcatgtccggcaggcaggggcggcggcccagccatggcgtgtcgtccagacgatcgccgagggccgggaacagcttgcgcgccaCCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCa                                                                                                              >  8:135817‑M2/114‑149 (MQ=255)                                        CGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGc                                                                                                          >  3:263533‑M1/1‑149 (MQ=255)                                                   ttCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGccc                                                                                                                  >  2:247500/1‑130 (MQ=255)                                                   ttCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGccc                                                                                                                  <  1:247500/130‑1 (MQ=255)                                                   ttCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTg                                                                                                 <  5:160968/147‑1 (MQ=255)                                                   gcccgatcaccgggcgcatgtccggcaggcaggggcggcggcccagccatggcgtgtcgtccagacgatcgccgagggccgggaacagcttgcgcgccaCCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTgg                                                                                                <  7:135817‑M2/50‑1 (MQ=255)                                                     cccGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCCCCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGcc                                                                                             >  4:181472/1‑149 (MQ=255)                                                      ccGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGccc                                                                                            >  4:9476/1‑149 (MQ=255)                                                       cGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGcc                                                                                                                   <  2:18931/125‑1 (MQ=255)                                                       cGGCCCTCGGCGATCGTCTGGACGACACGCCACGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCCCCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCg                                                                                           >  1:202274/1‑149 (MQ=255)                                                              cGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGcg                                                                                    >  7:93521/1‑149 (MQ=255)                                                                gCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGcggc                                                                                  >  4:280596/1‑149 (MQ=255)                                                                    tCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGcggccggc                                                                              >  7:115306/1‑149 (MQ=255)                                                                        cTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGgctgct                                                                          >  1:146543/1‑149 (MQ=255)                                                                           gacgacACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTgg                                                                        <  7:176610/148‑1 (MQ=255)                                                                              gacACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGa                                                                    <  4:92933/149‑1 (MQ=255)                                                                              gacACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCAGCAgccggccg                                                                     >  3:312166/1‑148 (MQ=255)                                                                               acacGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCAGCAgccggccgca                                                                   <  4:312166/149‑3 (MQ=255)                                                                                cccGCCATGGCTGGTCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAgc                                                                  <  7:281172/147‑1 (MQ=255)                                                                                 acGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAgct                                                                 >  8:282643/1‑149 (MQ=255)                                                                                   gCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCCGGGTGATCGGGCCGGTGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAgctg                                                                >  1:223670/1‑149 (MQ=255)                                                                                   gCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGc                                                                       <  1:315928/141‑1 (MQ=255)                                                                                   gCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGc                                                                       >  2:315928/1‑141 (MQ=255)                                                                                        ggCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACt                                                          >  4:282900/1‑149 (MQ=255)                                                                                         gCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTg                                                         >  3:289145/1‑149 (MQ=255)                                                                                         gCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTg                                                         <  2:36116/149‑1 (MQ=255)                                                                                             ggCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGa                                                     <  3:9476/149‑1 (MQ=255)                                                                                                cgccgccCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGcc                                                  <  7:282643/149‑1 (MQ=255)                                                                                                                 ggACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTACTCACTGGCGAGCCCCCCTTCACCGACCCcg                                 >  7:98389/1‑149 (MQ=255)                                                                                                                         gcCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCgcgctgt                           >  8:116035/1‑144 (MQ=255)                                                                                                                         gcCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCGCGCCTTAc                         <  3:282900/149‑1 (MQ=255)                                                                                                                          ccc‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCGCGCCTTACa                        <  2:269060/149‑1 (MQ=255)                                                                                                                          ccc‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCGCGCCTTACa                        <  8:93521/149‑1 (MQ=255)                                                                                                                                  aTCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAAGTTGGGGCTTGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAg                                                                   <  4:50154/99‑1 (MQ=255)                                                                                                                                  aTCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAg                                                                   >  3:50154/1‑99 (MQ=255)                                                                                                                                  aTCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCGCGCCTTACAGCGCGAc                 <  5:7138/149‑1 (MQ=255)                                                                                                                                     gggCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCGCGCCTTACAGCGCGACCCg              >  2:51700/1‑149 (MQ=255)                                                                                                                                      ggCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGgctgct                                                                          <  2:86449/88‑1 (MQ=255)                                                                                                                                      ggCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGgctgct                                                                          >  1:86449/1‑88 (MQ=255)                                                                                                                                        ccGGTGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCGCGCCTTACAGCGCGACCCGttt           <  2:223670/149‑1 (MQ=255)                                                                                                                                            cgccgcgccACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCGCGCCTTACAGCGCGACCCGTTTCGAc       <  3:181472/149‑1 (MQ=255)                                                                                                                                             gccgcgccACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCGCGCCTTACAGCGCGACCCGTTTCGACt      >  1:7416/1‑149 (MQ=255)                                                                                                                                                gcgccaCCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCGCGCCTTACAGCGCGACCCGTTTCGACTGaa   <  3:280596‑M2/143‑1 (MQ=255)                                                                                                                                                gcgccaCCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCGCGCCTTACAGCGCGACCCGTTTCGACTGaa   >  3:81926‑M2/7‑149 (MQ=255)                                                                                                                                                 cgccaCCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCGCGCCTTACAGCGCGACCCGTTTCGACTGAAc  >  1:99314‑M2/6‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                CTGGCAACCAGATCCAGTTGGGCCGCTGCGAGGCCTTGGCGCGCAAGCTGTTCCCGGCCCTCGGCGATCGTCTGGACGACACGCCATGGCTGGGCCGCCGCCCCTGCCTGCCGGACATGCGCCC‑GGTGATCGGGCCGGCGCCGCGCCACCCAGGGCTGTGGTTCAACTTCGGCCATGCCCATCACGGCCTCACGCTGGGCCCGGTCTGCGGCCGGCTGCTGGCCGAGCTGCTCACTGGCGAGCCCCCCTTCACCGACCCCGCGCCTTACAGCGCGACCCGTTTCGACTGAAC  >  NC_002947/4086257‑4086548

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.