| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5825499 = | 48 (0.950) | 4 (0.080) | 4/246 | NT | 8.1% | coding (796/813 nt) | thiG | thiazole synthase |
| ? | NC_002947 | 5825520 = | 45 (0.940) | coding (775/813 nt) | thiG | thiazole synthase | |||||
TGCGCCCGGCACGCATCACGAAGCTCTTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTTCATCAGCACCGCCTCACAGCCCATTTCCATGGC > NC_002947/5825382‑5825667 | tGCGCCCGGCACGCATCACGAAGCTCTTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTttc > 7:282233/1‑149 (MQ=255) cgcCCGGCACGCATCACGAAGCTCTTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCGGGGGTGATGGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTttctt < 7:209366/149‑1 (MQ=255) cgcCCGGCACGCATCACGAAGCTCTTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTttct < 3:280722/148‑1 (MQ=255) gcCCGGCACGCATCACGAAGCTCTTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTttcttc < 3:122035/149‑1 (MQ=255) ccGGCACGCATCACGAAGCTCTTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCgg < 2:173945/149‑1 (MQ=255) ccGCATCAAGAGCTTCGTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGAGTCAGTCGTCAGTTGCTCTTACTTGCTCAGACCATCCAGCGGCGAGGAGGCGCGGGCATAGAGTTTCTTCGGCATAc > 8:227891/2‑149 (MQ=255) cccacgcccagcagcctgtgctgatggcctaggccatgaaacacgcctttgtcgcgggtcgcatggcctacctgggtggtcgtatgccgaagaaactctatgccagcggcgaggaggcgctggCATAGAGTTTCTTCg < 8:164138‑M2/15‑1 (MQ=255) cccacgcccagcagccagtgctgatggccgaggccatgaaacacgccattgtcgcgggtcgcatggcctacctggctggtcgtatgccgaagaaactctatgccagcggcgaggaggcgctggCATAGAGTTTCTTCg > 7:164138‑M2/124‑138 (MQ=255) aCGAAGCTCTTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCg < 6:128571/136‑1 (MQ=255) aCGAAGCTCTTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCg > 5:128571/1‑136 (MQ=255) gAAGCTCTTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCTGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCg < 5:279342/134‑1 (MQ=255) gAAGCTCTTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCTCTGGCATAGAGTTTCTTCg > 6:279342/1‑134 (MQ=255) gAAGCTCTTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGAccagc > 2:11511/1‑147 (MQ=255) aaGCTCTTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGAccagccag < 1:192429/149‑1 (MQ=255) ggcggTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGCGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGGGCTGGCATAGAGTTTCTTCGGCa < 3:187760/123‑1 (MQ=255) ggcggTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGCGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGGGCTGGCATAGAGTTTCTTCGGCa > 4:187760/1‑123 (MQ=255) tgtgGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCcgc > 2:138039/1‑149 (MQ=255) tgGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGa > 6:231076/1‑149 (MQ=255) gggcTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATg < 1:11511/149‑1 (MQ=255) gcTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGc > 3:292337/1‑149 (MQ=255) ttCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCgt > 6:118096/1‑149 (MQ=255) ttCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCgt > 7:209195/1‑149 (MQ=255) gggggTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATgg > 5:295340/1‑149 (MQ=255) gggggTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATgg < 5:118096/149‑1 (MQ=255) gggggTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATg < 4:292337/148‑1 (MQ=255) gccattgtcgcgggtcgcatggcctacctggctggtcgtatgccgaagaaactctatgCCAGCGGCGAGGAGGCGCTGGCATa > 8:221727‑M1/59‑83 (MQ=255) gccattgtcgcgggtcgcatggcctacctggctggtcgtatgccgaagaaactctatgCCAGCGGCGAGGAGGCGCTGGCATa < 7:221727‑M1/25‑1 (MQ=255) gCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCcgc < 2:223784/118‑1 (MQ=255) tCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCAc > 4:269541/1‑149 (MQ=255) gATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATg < 6:22514/99‑1 (MQ=255) gATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATg > 5:22514/1‑99 (MQ=255) tCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGctgctg > 7:68494/1‑149 (MQ=255) gTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGc > 1:35672/1‑122 (MQ=255) gTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGc < 2:35672/122‑1 (MQ=255) atcaGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCtgggcgtg > 6:238060/1‑149 (MQ=255) atcaGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCtgggcgt < 6:295340/148‑1 (MQ=255) atcaGTAGCTCTTACTTGATGAGTCCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCTGCATACGAGGAGCCTGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCtgggcgtg < 8:209195/149‑1 (MQ=255) tcaGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCtgggcgtgg > 3:69943/1‑149 (MQ=255) gTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCtgggcgt > 4:36146/1‑144 (MQ=255) gTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCtgggcgt < 3:36146/144‑1 (MQ=255) ttACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGc < 1:40566/147‑1 (MQ=255) cgaagaaactctatgCCAGCGCCTCCTCGCCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCtgggcgtggg > 7:164138‑M1/16‑138 (MQ=255) cgaagaaactctatgCCAGCGCCTCCTCGCCGCTGGCATAGAGTTTCTTCGGCATACGACCACCCAGGTAGGCCATGCGACCCGCGACAAAGGCGTGTTTCATGGCCTAGGCCATCAGCACAGGCTGCtgggcgtggg < 8:164138‑M1/123‑1 (MQ=255) aCTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGa < 8:68494/148‑1 (MQ=255) gATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATg > 8:281079/1‑73 (MQ=255) gATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATg < 7:281079/73‑1 (MQ=255) tCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTtcatc < 3:164274/149‑1 (MQ=255) tCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACACGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTtcat > 4:164274/1‑148 (MQ=255) gACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTTCATCAg > 5:195787/1‑148 (MQ=255) gACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTTCATCAGc < 7:227891/149‑1 (MQ=255) tatgccagcgcctcctcgccgctggCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGc < 7:221727‑M2/58‑1 (MQ=255) tatgccagcgcctcctcgccgctggCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGc > 8:221727‑M2/26‑83 (MQ=255) cATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTTCATCAGCAcc > 5:244748/1‑149 (MQ=255) CAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTTCATCAGCACCGCCt < 6:26381‑M1/149‑1 (MQ=255) CAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATCGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTTCATCAGCACCGCCt < 8:253792‑M1/149‑1 (MQ=255) CGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTTCATCAGCACCGCCTca < 4:50246‑M1/148‑1 (MQ=255) gaggCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTTCATCAGCACCGCCTCACAGCCCAt > 7:229852/1‑149 (MQ=255) ggCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCtgggcgtg < 2:318970/108‑1 (MQ=255) ggCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCtgggcgtg > 1:318970/1‑108 (MQ=255) cgctggCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCtgggcgtgg > 3:188268‑M2/7‑107 (MQ=255) cgctggCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCtgggcgtgg < 4:188268‑M2/101‑1 (MQ=255) cgctggCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTTCATCAGCACCGCCTCACAGCCCATTTcc < 7:253792‑M2/143‑1 (MQ=255) gctggCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGa < 5:223016‑M2/112‑1 (MQ=255) gctggCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGa > 6:223016‑M2/6‑117 (MQ=255) ctggCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTTCATCAGCACCGCCTCACAGCCCATTTCCAt < 3:269541‑M2/145‑1 (MQ=255) cATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGAGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTTCATCAGCACCGCCTCACAGCCCATTTCCATGGc > 7:242747/1‑148 (MQ=255) | TGCGCCCGGCACGCATCACGAAGCTCTTGATGCGGCGGTGTGGGCGGGCTTCGCCGTCGGGGGTGATCGGCGTATCGTGCGATTCAGTCATCAGTTGCTCTTACTTGATCAGACCATCCAGCGGCGAGGAGGCGCTGGCATAGAGTTTCTTCGGCATACGACCAGCCAGGTAGGCCATGCGACCCGCGACAATGGCGTGTTTCATGGCCTCGGCCATCAGCACTGGCTGCTGGGCGTGGGCGATGGCCGAGTTCATCAGCACCGCCTCACAGCCCATTTCCATGGC > NC_002947/5825382‑5825667 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |