New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6079905	44 (0.870)	5 (0.100)	5/248	NT	10.6%	coding (319/399 nt)	PP_5331	acyl‑CoA thioesterase
	?	NC_002947	= 6079927	42 (0.870)					coding (341/399 nt)	PP_5331	acyl‑CoA thioesterase

GGCCTTCCTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGT  >  NC_002947/6079781‑6080073                                                                                                                                                   |                                                                                                                                                   ggCCTTCCTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGt                                                                                                                                                    >  4:54794/1‑147 (MQ=255) ggCCTTCCTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGt                                                                                                                                                    <  3:54794/147‑1 (MQ=255)     ttCCTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTattcg                                                                                                                                               <  5:185608‑M2/148‑6 (MQ=255)        cTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTAttcgtctt                                                                                                                                           <  6:86888/149‑1 (MQ=255)          ggTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTAttcgtcttcg                                                                                                                                         >  1:302345/1‑149 (MQ=255)           gTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTAttcgtcttcgt                                                                                                                                        >  4:25259/1‑149 (MQ=255)               ccGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGc                                                                                                                                     >  7:285666/1‑148 (MQ=255)                    tcgGTCGGCTCACAGATGTCTTTCTATACCCAGCCGCTGTAATTCCGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGGCCAGCGAATGGCGCACGGTCACCGAATCGGTATTCGTCTTCGTCGCTATCgt                                                                                                                               <  2:247911/148‑2 (MQ=255)                       gTCGGCGCACAGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACgg                                                                                                                            <  5:96282/149‑1 (MQ=255)                          ggCGCACAGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCa                                                                                                                          <  6:185608/148‑1 (MQ=255)                          ggCGCACAGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCa                                                                                                                          <  7:152156/148‑1 (MQ=255)                              cacaGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGt                                                                                                                     <  2:302345/149‑1 (MQ=255)                                 aGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAg                                                                                                                         >  1:129240/1‑142 (MQ=255)                                        tttCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCt                                                                                                           >  5:195087/1‑149 (MQ=255)                                             ataCCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTg                                                                                                      >  5:184357/1‑149 (MQ=255)                                                 ccAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCtc                                                                                                  <  4:38285/149‑1 (MQ=255)                                                 ccAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCtc                                                                                                  >  7:235096/1‑149 (MQ=255)                                                 ccAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCAATCGACGGCAGTGGTCGTACCCGCTCGGTGCCtc                                                                                                  >  3:201926/1‑149 (MQ=255)                                                       ccTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCt                                                                                            <  5:50975/149‑1 (MQ=255)                                                                cGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGc                                                                                        <  7:214940/144‑1 (MQ=255)                                                                cGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGc                                                                                        >  8:214940/1‑144 (MQ=255)                                                                   ccGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTgg                                                                                <  8:285666/149‑1 (MQ=255)                                                                      cAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGACACGCTGGCgg                                                                             >  7:61443/1‑149 (MQ=255)                                                                         cTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTa                                                                           >  3:311502/1‑148 (MQ=255)                                                                                     gatgGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATc                                                              >  6:265968/1‑149 (MQ=255)                                                                                            gAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCgg                                                       >  7:63914/1‑149 (MQ=255)                                                                                              ggTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCTATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGt                                                     <  4:201926/149‑1 (MQ=255)                                                                                                      gCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGcc                                             >  5:149664/1‑149 (MQ=255)                                                                                                        gacgacCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCa                                           >  6:208723/1‑149 (MQ=255)                                                                                                           gacCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTg                                        <  5:208723/149‑1 (MQ=255)                                                                                                                gCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGt                                                                                                                        >  4:122527/1‑64 (MQ=255)                                                                                                                gCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGt                                                                                                                        <  3:122527/64‑1 (MQ=255)                                                                                                                 cTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTattcgctggacagcgggtcgtcgctccacacctcgaccatcatctggatcgagctgcggccgatttccagggtctgggtatagaaagac                                                           <  1:133387‑M2/124‑90 (MQ=255)                                                                                                                 cTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTattcgctggacagcgggtcgtcgctccacacctcgaccatcatctggatcgagctgcggccgatttccagggtctgggtatagaaagac                                                           >  2:133387‑M2/1‑35 (MQ=255)                                                                                                                    tCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGcaatcaat                               >  2:59734/1‑149 (MQ=255)                                                                                                                     ccAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGcaatcaat                               >  7:212035/1‑148 (MQ=255)                                                                                                                      cAGCGAATGGCGCAAGGTCACCGAAGCGGTattcgctggacagcgggtcgtcgctccacacctcgaccatcatctggatcgagctgcggccgatttccagggtctgggtatagaaagacagctgtgcgccgaccgcgacgggtaccag                              <  8:166520‑M2/148‑119 (MQ=255)                                                                                                                      cAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAgg                                               <  7:94687/131‑1 (MQ=255)                                                                                                                      cAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAgg                                               >  8:94687/1‑131 (MQ=255)                                                                                                                      cAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGcaatcaat                               >  6:325130/1‑147 (MQ=255)                                                                                                                       aGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCAt                                                                    >  6:121848/1‑109 (MQ=255)                                                                                                                       aGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCAt                                                                    <  5:121848/109‑1 (MQ=255)                                                                                                                       aGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGcaatcaat                               >  5:330445/1‑146 (MQ=255)                                                                                                                       aGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATgag                            <  6:330445/149‑1 (MQ=255)                                                                                                                         cGAATGGCGCAAGGTCACCGAAGCGGTattcgctggacagcgggtcgtcgctccacacctcgaccatcatctggatcgagctgcggccgatttccagggtctgggtatagaaagacagctgtgcgccgaccgcgacgggtaccaggaag                          <  5:18224‑M2/149‑123 (MQ=255)                                                                                                                           aaTGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGagaaga                        <  5:265968/149‑1 (MQ=255)                                                                                                                               gcgcAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACTGCAGTGGTCGTACCCGCGCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTATACTCATTGCATCTGCCGGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACg                     <  8:235096/148‑1 (MQ=255)                                                                                                                                cgcAAGGTCACCGAAGCGGTattcgctggacagcgggtcgtcgctccacacctcgaccatcatctggatcgagctgcggccgatttccagggtctgggtatagaaagacagctgtgcgccgaccgcgacgggtaccaggaaggccatgc                   >  7:166520‑M2/1‑20 (MQ=255)                                                                                                                                       tCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTa            >  8:173498/1‑149 (MQ=255)                                                                                                                                         aCCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTAcc          >  8:163308/1‑149 (MQ=255)                                                                                                                                             aaGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCttt       >  4:73690/1‑148 (MQ=255)                                                                                                                                                 ggTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGCTCGCAATGGCTACCTTTCAGGt  >  5:136806/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                   GGCCTTCCTGGTACCCGTCGCGGTCGGCGCACAGCTGTCTTTCTATACCCAGACCCTGGAAATCGGCCGCAGCTCGATCCAGATGATGGTCGAGGTGTGGAGCGACGACCCGCTGTCCAGCGAATGGCGCAAGGTCACCGAAGCGGTATTCGTCTTCGTCGCCATCGACGGCAGTGGTCGTACCCGCTCGGTGCCTCGTCGCTGAGCCACGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGT  >  NC_002947/6079781‑6080073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.