New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2787315 | 22 (0.760) | 4 (0.140) | 4/278 | 3.4 | 15.7% | coding (326/564 nt) | ahpC | peroxiredoxin/alkylhydroperoxide reductase small subunit |
? | NC_002947 | = 2787323 | 22 (0.790) | coding (334/564 nt) | ahpC | peroxiredoxin/alkylhydroperoxide reductase small subunit | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GCCGAGTTCCAGAAGCTGGGCGTGGAAATCTACGGTGTTTCCACTGACACCCACTTCACTCACAAAGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2787164‑2787315 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgaTCAGCACGTCGAAGTTGCGCGAAATGACGTGAGTCGGGTCACCGATCAGCGGGTATTCGATCTTGCCGATGGTGTCCGAAGTGTCGTGCCAGGCTTTGTGAGTGAAGT < NC_002947/2787323‑2787216 GCCGAGTTCCAGAAGCTGGGCGTGGAAATCTACGGTGTTTCCACTGACACCCACTTCACTCACAAAGCCTGTAACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCAATTCGCGCAAC > 2:2438/1‑147 GCCGAGTTCCAGAAGCTGGGCGTGGAAATCTACGGTGTTTCCACTGACACCCACTTCACTCACAAAGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAAC < 1:101414/147‑1 GCCGAGTTCCAGAAGCTGGGCGTGGAAATCTACGGTGTTTCCACTGACACCCACTTCACTCACAAAGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAAC < 1:103881/147‑1 CGAGTTCCAGAAGCTGGGCGTGGAAATCTACGGTGTTTCCACTGACACCCACTTCACTCACAAAGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTC > 7:73814/1‑148 CAAAGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGATCAGCACGTCGAAGTTGCG > 5:44622/1‑109 AAAGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGATCAGCACGTCGAAGTTGCGC < 6:44622/109‑1 GATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGATCAGCACGTCGAAGTTGCGCGAAATGACGTGAGTCGGGTCACCGATCAGCGGGTATTCGATCTTGCCGATGGTGTCCGAAGTGTCGTGCCAGGC > 6:50495/1‑148 TGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGATCAGCACGTCGAAGTTGCGCGAAATGACGTGAGTCGGGTCACCGATCAGCGGGTATTCGATCTTGCCGATGGTGTCCGAAGTGTCGTGCCAGGCTTTGTGAGTGAAGT < 5:50495/148‑1 GCCGAGTTCCAGAAGCTGGGCGTGGAAATCTACGGTGTTTCCACTGACACCCACTTCACTCACAAAGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2787164‑2787315 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgaTCAGCACGTCGAAGTTGCGCGAAATGACGTGAGTCGGGTCACCGATCAGCGGGTATTCGATCTTGCCGATGGTGTCCGAAGTGTCGTGCCAGGCTTTGTGAGTGAAGT < NC_002947/2787323‑2787216 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |