| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2787315 | 22 (0.760) | 4 (0.140) | 4/278 | 3.4 | 15.7% | coding (326/564 nt) | ahpC | peroxiredoxin/alkylhydroperoxide reductase small subunit |
| ? | NC_002947 | = 2787323 | 22 (0.790) | coding (334/564 nt) | ahpC | peroxiredoxin/alkylhydroperoxide reductase small subunit | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTTCCAGAAGCTGGGCGTGGAAATCTACGGTGTTTCCACTGACACCCACTTCACTCACAAAGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGAGCTGAACGACGGTGGTGTAGGCCGTGATGCTGCTGAGCTGCTGCGTAAGGTCAAG > NC_002947/2787169‑2787448 | gTTCCAGAAGCTGGGCGTGGAAATCTACGGTGTTTCCACTGACACCCACTTCACTCACAAAGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGAc < 1:53745/148‑1 (MQ=255) ggTGTTTCCACTGACAACCACTTCACTCACAAAGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGcc < 4:15465/147‑1 (MQ=255) ccACTTCACTCACAAAGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCtt > 2:174784/1‑144 (MQ=255) cACTTCACTCACAAAGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTc < 1:174784/144‑1 (MQ=255) aaaGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAGCTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAg > 2:149683/1‑148 (MQ=255) gACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGa > 3:131939/1‑148 (MQ=255) cacTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGAtt > 1:172625/1‑148 (MQ=255) cacTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGAtt > 2:63841/1‑148 (MQ=255) cTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGt > 3:57242/1‑148 (MQ=255) ggACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTAGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGa < 1:100053/147‑1 (MQ=255) acCATCGGCAAGATCGAAAACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAAATTCGACGTGCTGATCGAAGAAGCCGGCATGGCAGCACGCGGTACCTTAGTGATCAACACTGAAGGCCAGCTCAAGATTGTCGAGCTGa > 8:37928/1‑148 (MQ=255) cATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGAGCTGAac < 7:66394/148‑1 (MQ=255) aTCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGAGCTGAacg > 2:38995/1‑148 (MQ=255) aGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGAGCTGAACGACggtgg < 8:73814/148‑1 (MQ=255) aaTACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGAGCTGAACGACGGTGGTGTAgg > 2:17904/1‑148 (MQ=255) ccGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGCCCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGAGCTGAACGACGGTGGTGTAGGCCGTg > 3:19383/1‑148 (MQ=255) gCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGAGCTGAACGACGGTGGTGTAGGCCGTGAt < 1:69918/148‑1 (MQ=255) cGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGAGCTGAACGACGGTGGTGTAGGCCGTGATgctgct < 8:8337/148‑1 (MQ=255) cccGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGAGCTGAACGACGGTGGTGTAGGCCGTGATGCTGCTGAgctg > 6:87423/1‑148 (MQ=255) gTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGAGCTGAACTACGGTGGTGTAGGCCGTGATGCTGCTGAGCTGCTGCGTAAgg < 1:2438/148‑1 (MQ=255) tttCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGAGCTGAACGACGGTGGTGTAGGCCGTGATGCTGCTGAGCTGCTGCGTAAGGTCaa < 1:38995/148‑1 (MQ=255) ttCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGAGCTGAACGACGGTGGTGTAGGCCGTGATGCTGCTGAGCTGCTGCGTAAGGTCAAg < 4:57242/148‑1 (MQ=255) | GTTCCAGAAGCTGGGCGTGGAAATCTACGGTGTTTCCACTGACACCCACTTCACTCACAAAGCCTGGCACGACACTTCGGACACCATCGGCAAGATCGAATACCCGCTGATCGGTGACCCGACTCACGTCATTTCGCGCAACTTCGACGTGCTGATCGAAGAAGCCGGCCTGGCCGACCGCGGTACCTTCGTGATCAACCCGGAAGGCCAGATCAAGATTGTCGAGCTGAACGACGGTGGTGTAGGCCGTGATGCTGCTGAGCTGCTGCGTAAGGTCAAG > NC_002947/2787169‑2787448 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |