| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 2 (0.070) | 17 (0.600) +CGGG |
15/282 | 1.0 | 89.7% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 2 (0.070) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
TTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGC > NC_002947/5681268‑5681557 | ttCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTCTCATTGCCACTGCATGAACcgc > 1:171170/1‑148 (MQ=255) ccGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggg < 3:105969‑M1/148‑5 (MQ=255) cGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCCCGCTTTAATTGCCACTGCATGAACCGCcgggg > 2:22673‑M1/1‑143 (MQ=255) ttaataaATGCAAACACATACGTCGTGTGGTGGGTTGGGTTCTTGTTGTTATGCTTTTGGTTTCTTTTTTTGTGGGAGGGGCGTTTTGTCGCTAATGGGGCGCTAAGCGGCCCCAGGCTCTCATTGCCACTGCATGAACcgccggggc < 2:171170/147‑7 (MQ=255) tACATGCAAACACCGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgct < 5:103686‑M1/148‑11 (MQ=255) aCATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctg < 3:141998‑M1/148‑12 (MQ=255) gCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGGCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgca < 5:69567‑M1/148‑16 (MQ=255) gggCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGACAGGGGCGCGAAGCGCCCCCAGCCTTTCATTGCCACTGCATGAACCGCcggggctgctgcccaacccaatagcgacacaagcaag > 6:127468‑M1/1‑111 (MQ=255) gggCTGGGTGCCTGTTGTGATGCTGATGGCTTCGTTCTTTGAGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGCAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgggcctgcttcgcagccctatagcgacacaaggatg > 6:127464‑M1/1‑111 (MQ=255) tGATGGCTTCGTTCTTTGTGGGAGCGGCCATGTGTCGCGAAAGGGGCGCGAATCGGCCCCAGGCTTTAATTGCCACAGCATGAACCGCCGGGGGAGCTTCGCCGCCCAATAGCGACACAACGCCGCTCCCCCAACCAACCCCCAGGcc > 8:110019/1‑148 (MQ=12) cGGCCTTGTGCCGCTAACGGGGCGCTACGGGGCCCACGGCTTTCATTCCCACTGCTTCAACCGCCGGGGCGGCGGCCCAGCCTTATCGCCAAACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAgg < 4:149899/148‑1 (MQ=255) gcgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccacacccgaccaccaggccctgcgcctcacagcctaaccaaggtcaggttgcag > 6:72106‑M1/1‑52 (MQ=255) ggggCGCGACGCGGCCCCAGGCTTTCATTCCCACTGCATCAACCGCcggggctgctgcgcagccctagcgcgacaaaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcg < 7:759‑M1/148‑103 (MQ=255) ccccAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgccgccctatcgcgccacaaggccgctcccacgccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcccgcaccagcct > 7:149938‑M1/1‑32 (MQ=255) cAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgccacaaggccgctcccactacagaccaccaggccctgcgcctcacatactaaccaagggcaggttgcagatccgcgtcacgcacccgccttt > 7:138311‑M1/1‑29 (MQ=255) cAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatagcgacaccacgccgcgcccactccagacccccaggccctgcgccccaccacctaaccaacgtcaggttgcacaaccgcgtcacgcaccagccttt > 4:27183‑M1/1‑29 (MQ=255) cATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcacccgcctttccaatgcgaccaggtccggt > 4:123213‑M1/1‑10 (MQ=255) aTGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcga > 5:58758‑M1/1‑9 (MQ=255) tGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgac < 6:58758‑M1/136‑129 (MQ=255) aaCCGCcggggctgctgcgcagccctatcgcgccacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtaccc > 6:74613‑M1/1‑6 (MQ=255) ccgccgggccggcggcgcagccctagcgccacaaaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtacccgc < 7:110019‑M1/148‑145 (MQ=255) gccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtacccgcgc > 8:8012‑M1/1‑2 (MQ=255) | TTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGC > NC_002947/5681268‑5681557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |