| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 2 (0.070) | 17 (0.600) +CGGG |
15/282 | 1.0 | 89.7% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 2 (0.070) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
CGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGC > NC_002947/5681273‑5681557 | cgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccccgctttaattgccactgcatgaaccgccgggg > 2:22673‑M2/148‑148 (MQ=255) tacatgcaaacaccgacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggctgct < 5:103686‑M2/6‑1 (MQ=255) acatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGctgctg < 3:141998‑M2/7‑1 (MQ=255) gcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtggcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCa < 5:69567‑M2/11‑1 (MQ=255) gggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgacaggggcgcgaagcgcccccagcctttcattgccactgcatgaaccgccgggGCTGCTGCCCAACCCAATAGCGACacaagcaag > 6:127468‑M2/116‑144 (MQ=255) gggctgggtgcctgttgtgatgctgatggcttcgttctttgagggagcggccttgtgtcgcgaaaggggcgcgcagcggccccaggctttcattgccactgcatgaaccgccgggCCTGCTTCGCAGCCCTATAGCGACAcaaggatg > 6:127464‑M2/116‑145 (MQ=255) tGATGGCTTCGTTCTTTGTGGGAGCGGCCATGTGTCGCGAAAGGGGCGCGAATCGGCCCCAGGCTTTAATTGCCACAGCATGAACCGCCGGGGGAGCTTCGCCGCCCAATAGCGACACAACGCCGCTCCCCCAACCAACCCCCAGGcc > 8:110019/1‑148 (MQ=12) cGGCCTTGTGCCGCTAACGGGGCGCTACGGGGCCCACGGCTTTCATTCCCACTGCTTCAACCGCCGGGGCGGCGGCCCAGCCTTATCGCCAAACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAgg < 4:149899/148‑1 (MQ=255) gcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACACCCGACCACCAGGCCCTGCGCCTCACAGCCTAACCAAGGTCAGGTTGCAg > 6:72106‑M2/57‑147 (MQ=255) ggggcgcgacgcggccccaggctttcattcccactgcatcaaccgccgggGCTGCTGCGCAGCCCTAGCGCGACAAAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCcgcg < 7:759‑M2/98‑1 (MQ=255) ccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCCGCCCTATCGCGCCACAAGGCCGCTCCCACGCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCCCGCACCAGCCt > 7:149938‑M2/37‑148 (MQ=255) caggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGCCACAAGGCCGCTCCCACTACAGACCACCAGGCCCTGCGCCTCACATACTAACCAAGGGCAGGTTGCAGATCCGCGTCACGCACCCGCCttt > 7:138311‑M2/34‑147 (MQ=255) caggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATAGCGACACCACGCCGCGCCCACTCCAGACCCCCAGGCCCTGCGCCCCACCACCTAACCAACGTCAGGTTGCACAACCGCGTCACGCACCAGCCttt > 4:27183‑M2/34‑147 (MQ=255) catgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCCGCCTTTCCAATGCGACCAGGTCCGGt > 4:123213‑M2/15‑148 (MQ=255) atgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGa > 5:58758‑M2/14‑136 (MQ=255) tgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAc < 6:58758‑M2/124‑1 (MQ=255) aaccgccgggGCTGCTGCGCAGCCCTATCGCGCCACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAccc > 6:74613‑M2/11‑148 (MQ=255) ccgccgggCCGGCGGCGCAGCCCTAGCGCCACAAAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCcgc < 7:110019‑M2/140‑1 (MQ=255) gccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCgcgc > 8:8012‑M2/7‑148 (MQ=255) | CGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGC > NC_002947/5681273‑5681557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |