New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 478290	41 (0.600)	7 (0.130)	6/224	6.9	20.5%	intergenic (+38/+72)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	= 478325	22 (0.410)					intergenic (+73/+37)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
Rejected: Coverage evenness skew score above cutoff.

TCCGGGTGTGGGCAAGTGCATGGCGCAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGA  >  NC_002947/478144‑478428                                                                                                                                                    |                                                                                                                                           tCCGGGTGTGGGCAAGTGCATGGCGCAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTacag                                                                                                                                          >  7:49572/1‑147 (MQ=255)           ggCAAGTTCATGGCGCAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAg                                                                                                                                 <  6:10612/148‑1 (MQ=255)           ggCAAGTGCATGGCGCAGCTGTGGCAGGAAGCGCAGATCGATCAGGTTCTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGc                                                                                                                                <  1:120973/149‑1 (MQ=255)           ggCAAGTGCATGGCGCAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGc                                                                                                                                <  4:269807/149‑1 (MQ=255)                gTGCATGGCGCAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAAc                                                                                                                           <  8:99671/149‑1 (MQ=255)                gTGCATGGCGCAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAAc                                                                                                                           >  1:357516/1‑149 (MQ=255)                   cATGGCGCAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCt                                                                                                                                    >  1:162066/1‑137 (MQ=255)                   cATGGCGCAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCt                                                                                                                                    <  2:162066/137‑1 (MQ=255)                   cATGGCGCAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACctc                                                                                                                        <  3:204539/149‑1 (MQ=255)                    aTGGCGCAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACctct                                                                                                                       <  5:267708/149‑1 (MQ=255)                    aTGGCGCAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACctct                                                                                                                       <  3:344295/149‑1 (MQ=255)                       gcggAGCTGTGGCAGGAAGCGCATATCGCTCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGAt                                                                                                                    <  2:357516/149‑1 (MQ=255)                       gcgcAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTGCTATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGa                                                                                                                     <  1:109685/149‑1 (MQ=255)                         gcAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGAtgt                                                                                                                  >  7:201928/1‑149 (MQ=255)                             cTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGc                                                                                                              <  3:156748/149‑1 (MQ=255)                                tgGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGcccc                                                                                                           >  7:310915/1‑149 (MQ=255)                                tgGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGcccc                                                                                                           <  8:300470/149‑1 (MQ=255)                                   cAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTg                                                                                                        <  3:272323/149‑1 (MQ=255)                                    aGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGt                                                                                                       <  8:201928/149‑1 (MQ=255)                                      gAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAg                                                                                                     >  3:314771/1‑149 (MQ=255)                                            cAGATCGATCAGGTACTGGCCCCCGTGGCCTTTTAGTGGCGCGGGTTGCAGTTGACGCGCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCgg                                                                                               <  8:279070/149‑1 (MQ=255)                                                  gatcAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTa                                                                                          <  7:159667/148‑1 (MQ=255)                                                        gTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGa                                                                                   <  4:314771/149‑1 (MQ=255)                                                        gTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGACGGGGTTTAccgcgg                                                                                    >  2:71518/1‑144 (MQ=255)                                                            tGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGCTGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAagag                                                                               >  8:371224/1‑149 (MQ=255)                                                            tGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGAtgtgt                                                                                                                <  4:349792/116‑1 (MQ=255)                                                            tGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGAtgtgt                                                                                                                >  3:349792/1‑116 (MQ=255)                                                             ggCCCCCGGGGCCTTTGTGTGCCGCGGGTGGCCGTTGACCCCCGCTTGAGCCTG‑TATCGCCCTCTTCGCGGGTAACCCCGCTCCTACCACGGGCTGAGCCCAACCTCTGTGGTGGGCCCCCTGTCGGCGCGGGTTTACCCGCGAAGAgg                                                                              <  8:310915/149‑1 (MQ=255)                                                              gCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTTAACCCGCTGCTTCGCCGGGCTGGGGCCAGCCCGGGATGTGTGCCCCCGGGAGGAGCGGGTTTACCCGCGAAGAGGc                                                                             >  1:153863/1‑149 (MQ=255)                                                                                            ccgTTGACGCCGGCTGTCGCCTG‑AAGCGCCCTTTGCGCGGGTAAACCCGTTCCTCCCCGGGGCTGACCCAAACCTCTTATGTGGGCCCCGTGTTGTCGGGTTTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTc                                                <  8:27809/146‑1 (MQ=255)                                                                                             aGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTGCTAAGACCGGCGGAGCCCAACCTCTGATGTGTGGCCCCTGTTGGAGCGGGTTTTCCCGCGAAGAGGCCGGTAGGGCTAACCGCGCGGGGAAGccgc                                                >  4:108951/1‑145 (MQ=255)                                                                                             aGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTc                                                >  7:109524/1‑147 (MQ=255)                                                                                                                    tagcGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCttt                        <  1:65808/146‑1 (MQ=255)                                                                                                                    tATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCttt                        <  8:109524/149‑1 (MQ=255)                                                                                                                      tCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGa                      <  2:73536/149‑1 (MQ=255)                                                                                                                       cGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCGCGAGCGCTTTCAGCCGTTCACCTTTGAg                     >  7:169751/1‑149 (MQ=255)                                                                                                                        ggCCTCTTCGCGGGAAAACCCGCTCCTACGCCGGGCTGAGCCCAACCTCTGATGTGGGCCCCCTGTCGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGt                    <  2:45954/149‑1 (MQ=255)                                                                                                                              ttCGCGGGTAAACCCCCTCCTACCACCGGCTGACCCCAACCACTGATGTGTGCCCCCAGTAGGAGCCGGAATAAACGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTATCAGCCGTTCACCTATGAGTGCtaag              >  2:331972/1‑146 (MQ=255)                                                                                                                                   gggTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGTGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTc                                      >  1:126614/1‑120 (MQ=255)                                                                                                                                   gggTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTc                                      <  2:126614/120‑1 (MQ=255)                                                                                                                                        aaCCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCt    <  2:145908/149‑1 (MQ=255)                                                                                                                                          cccGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGa  >  7:363830/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                           TCCGGGTGTGGGCAAGTGCATGGCGCAGCTGTGGCAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTG‑TATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGA  >  NC_002947/478144‑478428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.