New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 478290	41 (0.600)	7 (0.130)	6/224	6.9	20.5%	intergenic (+38/+72)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	= 478325	22 (0.410)					intergenic (+73/+37)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
Rejected: Coverage evenness skew score above cutoff.

CAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTGTATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCTTGCACCAACGGCTTCACATCCAC  >  NC_002947/478178‑478466                                                                                                                                                    |                                                                                                                                              cAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTGTATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTg                                                                                                                                              <  3:272323/149‑1 (MQ=255)  aGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTGTATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGt                                                                                                                                             <  8:201928/149‑1 (MQ=255)    gAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTGTATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAg                                                                                                                                           >  3:314771/1‑149 (MQ=255)          cAGATCGATCAGGTACTGGCCCCCGTGGCCTTTTAGTGGCGCGGGTTGCAGTTGACGCGCGCTTGAGCCTGTATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCgg                                                                                                                                     <  8:279070/149‑1 (MQ=255)                gatcAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTGTATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTa                                                                                                                                <  7:159667/148‑1 (MQ=255)                      gTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTGTATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGa                                                                                                                         <  4:314771/149‑1 (MQ=255)                      gTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTGTATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGACGGGGTTTAccgcgg                                                                                                                          >  2:71518/1‑144 (MQ=255)                          tGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTGTATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGCTGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAagag                                                                                                                     >  8:371224/1‑149 (MQ=255)                           ggCCCCCGGGGCCTTTGTGTGCCGCGGGTGGCCGTTGACCCCCGCTTGAGCCTGTATCGCCCTCTTCGCGGGTAACCCCGCTCCTACCACGGGCTGAGCCCAACCTCTGTGGTGGGCCCCCTGTCGGCGCGGGTTTACCCGCGAAGAgg                                                                                                                    <  8:310915/149‑1 (MQ=255)                            gCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTGTATCGGCCTCTTCGCGGGTTAACCCGCTGCTTCGCCGGGCTGGGGCCAGCCCGGGATGTGTGCCCCCGGGAGGAGCGGGTTTACCCGCGAAGAGGc                                                                                                                   >  1:153863/1‑149 (MQ=255)                                                          ccgTTGACGCCGGCTGTCGCCTGAAGCGCCCTTTGCGCGGGTAAACCCGTTCCTCCCCGGGGCTGACCCAAACCTCTTATGTGGGCCCCGTGTTGTCGGGTTTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTc                                                                                      <  8:27809/146‑1 (MQ=255)                                                           aGTTGACGCCCGCTTGAGCCTGTATCGGCCTCTTCGCGGGTAAACCCGCTGCTAAGACCGGCGGAGCCCAACCTCTGATGTGTGGCCCCTGTTGGAGCGGGTTTTCCCGCGAAGAGGCCGGTAGGGCTAACCGCGCGGGGAAGccgc                                                                                      >  4:108951/1‑145 (MQ=255)                                                           aGTTGACGCCCGCTTGAGCCTGTATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTc                                                                                      >  7:109524/1‑147 (MQ=255)                                                                                 tagcGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCttt                                                              <  1:65808/146‑1 (MQ=255)                                                                                 tATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCttt                                                              <  8:109524/149‑1 (MQ=255)                                                                                   tCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGa                                                            <  2:73536/149‑1 (MQ=255)                                                                                    cGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCGCGAGCGCTTTCAGCCGTTCACCTTTGAg                                                           >  7:169751/1‑149 (MQ=255)                                                                                     ggCCTCTTCGCGGGAAAACCCGCTCCTACGCCGGGCTGAGCCCAACCTCTGATGTGGGCCCCCTGTCGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGt                                                          <  2:45954/149‑1 (MQ=255)                                                                                           ttCGCGGGTAAACCCCCTCCTACCACCGGCTGACCCCAACCACTGATGTGTGCCCCCAGTAGGAGCCGGAATAAACGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTATCAGCCGTTCACCTATGAGTGCtaag                                                    >  2:331972/1‑146 (MQ=255)                                                                                                gggTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGTGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTc                                                                            >  1:126614/1‑120 (MQ=255)                                                                                                gggTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTc                                                                            <  2:126614/120‑1 (MQ=255)                                                                                                     aaCCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCt                                          <  2:145908/149‑1 (MQ=255)                                                                                                       cccGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGa                                        >  7:363830/1‑149 (MQ=255)                                                                                                                        cTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGt                                              >  6:56127/1‑126 (MQ=255)                                                                                                                        cTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGt                                              <  5:56127/126‑1 (MQ=255)                                                                                                                         tGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGTAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCTTg                       >  4:221785/1‑148 (MQ=255)                                                                                                                           aGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCCAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCTTGCAc                    >  1:155079/1‑149 (MQ=255)                                                                                                                               cAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCTTGCACCAAc                >  6:303796/1‑149 (MQ=255)                                                                                                                                            gtgCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCCAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCTTGCACCAACGGCTTCACATCCa   >  6:115479/1‑149 (MQ=255)                                                                                                                                             tgCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTAAGCCCGGCTTGCACCAACGGCTTCACATCCAc  >  7:288816/1‑149 (MQ=255)                                                                                                                                                ccccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCTTGCa                     <  7:319323/127‑1 (MQ=255)                                                                                                                                                ccccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCTTGCa                     >  8:319323/1‑127 (MQ=255)                                                                                                                                                    |                                                                                                                                              CAGGAAGCGCAGATCGATCAGGTACTGGCCCCCGTGGCCTTTGAGTGGCGCGGGTTGCAGTTGACGCCCGCTTGAGCCTGTATCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGCTGAGCCCAACCTCTGATGTGTGCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCTTGCACCAACGGCTTCACATCCAC  >  NC_002947/478178‑478466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.