| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 10913 | 23 (0.430) | 3 (0.060) | 3/254 | NT | 14.2% | coding (1372/1521 nt) | dnaA | chromosomal replication initiator protein |
| ? | NC_002947 | = 10947 | 14 (0.270) | coding (1406/1521 nt) | dnaA | chromosomal replication initiator protein | |||||
GCTGCAAGACAAACTGGTCAGTGTGGATAACATTCAGCGTACCGTCGCTGAGTACTACAAGATCAAGATCTCCGATCTGTTGTCCAAGCGTCGTTCGCGTTCTGTCGCGCGCCCGCGTCAGGTAGCCATGGCCCTGTCCAAGGAGTTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/10762‑10913‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccaCCGAACATGTCGCCGATTTCCGGCAGACTGTGGTTGGTCAACTCCTTGGACAGGGCCATGGCTACCTGACGCGGGCGCGCGACAGAACGCGAACGACGCTTGGACAACAGATCGGAGATCTTGATCTTGTAGTACTCAGCGACGGTA < NC_002947/10947‑10801 GCTGCAAGACAAACTGGTCAGTGTGGATAACATTCAGCGTACCGTCGCTGAGTACTACAAGATCAAGATCTCCGATCTGTTGTCCAAGCGTCGTTCGCGTTCTGTCGCGCGCCCGCGTCAGGTAGCCATGGCCCTGTCCAAGGAGTTGA > 4:296467/1‑149GCTGCAAGACAAACTGGTCAGTGTGGATAACATTCAGCGTACCGTCGCTGAGTACTACAAGATCAAGATCTCCGATCTGTTGTCCAAGCGTCGTTCGCGTTCTGTCGCGCGCCCGCGTCAGGTAGCCATGGCACTGTCCAAGGAGTTGA > 8:242484/1‑149GCTGCAAAACAAACTGGTCAGTGTGGATAACATTCAGCGTACCGTCGCTGAGTACTACAAGATCAAGATCTCCGATCTGTTGTCCAAGCGTCGTTCGCGTTCTGTCGCGCGCCCGCGTCAGGTAGCCATGGCCCTGTCCAAGGAGTTGA < 1:253712/149‑1 CTGCAAGACAAACTGGTCAGTGTGGATAACATTCAGCGTACCGTCGCTGAGTACTACAAGATCAAGATCTCCGATCTGTTGTCCAAGCGTCGTTCGCGTTCTGTCGCGCGCCCGCGTCAGGTAGCCATGGCCCTGTCCAAGGAGTTGAC < 2:257443/149‑1 CTGCAAGACAAACTGGTCAGTGTGGATAACATTCAGCGTACCGTCGCTGAGTACTACAAGATCAAGATCTCCGATCTGTTGTCCAAGCGTCGTTCGCGTTCTGTCGCGCGCCCGCGTCAGGTAGCCATGGCCCTGTCCAAGGAGTTGAC > 8:98026/1‑149 TGAGTACTACAAGATCAAGATCTCCGATCTGTTGTCCAAGCGTCGTTCGCGTTCTGTCGCGCGCCCGCGTCAGGTAGCCATGGCCCTGTCCAAGGAGTTGACCACCGAACATGTCGCCGATTTCCGGCAGACTGTGGTTGGTCAACT < 3:273821/147‑1 TGAGTACTACAAGATCAAGATCTCCGATCTGTTGTCCAAGCGTCGTTCGCGTTCTGTCGCGCGCCCGCGTCAGGTAGCCATGGCCCTGTCCAAGGAGTTGACCACCGAACATGTCGCCGATTTCCGGCAGACTGTGGTTGGTCAACT > 4:273821/1‑147 GTACTACAAGATCAAGATCTCCGATCTGTTGTCCAAGCGTCGTTCGCGTTCTGTCGCGCGCCCGCGTCAGGTAGCCATGGCCCTGTCCAAGGAGTTGACCACCGAACATGTCGCCGATTTCCGGCAGACTGTGGTTGGTCAACTCCTTG < 7:214307/149‑1 GACCACCGAACATGTCGCCGATTTCCGGCAGACTGTGGTTGGTCAACTCCTTGGACAGGGCCATGGCTACCTGACGCGGGCGCGCGACAGAACGCGAACGACGCTTGGACAACAGATCGGAGATCTTGATCTTGTAGTACTCAGCGACG > 6:57549/1‑149 CACCGAACATGTCGCCGATTTCCGGCAGACTGTGGTTGGTCAACTCCTTGGACAGGGCCATGGCTACCTGCCGCGGGCGCGCGACAGAACGCCAACGACGCTTGGACAACAGATCGGAGATCTTCATCTTGTAGTACTCAGCCACGGTA > 5:63020/1‑149 GCTGCAAGACAAACTGGTCAGTGTGGATAACATTCAGCGTACCGTCGCTGAGTACTACAAGATCAAGATCTCCGATCTGTTGTCCAAGCGTCGTTCGCGTTCTGTCGCGCGCCCGCGTCAGGTAGCCATGGCCCTGTCCAAGGAGTTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/10762‑10913‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccaCCGAACATGTCGCCGATTTCCGGCAGACTGTGGTTGGTCAACTCCTTGGACAGGGCCATGGCTACCTGACGCGGGCGCGCGACAGAACGCGAACGACGCTTGGACAACAGATCGGAGATCTTGATCTTGTAGTACTCAGCGACGGTA < NC_002947/10947‑10801 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |