New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 115176550 (0.930)3 (0.060) 3/254 NT 5.6% coding (490/1827 nt) edd phosphogluconate dehydratase
?NC_002947 = 1151792 53 (1.020)coding (517/1827 nt) edd phosphogluconate dehydratase

GGGTGACCCAGGGCGAGCCGGGCATGGAGCTGGCGATCGCCAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1151616‑1151765
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatggTCGGCAGGTGGCCGAAGCGCAACGCGCCCATCATCAGG  <  NC_002947/1151792‑1151755
                                                                                                                                                                                            
GGGTGACCCAGGGCGAGCCGGGCATGGAGCTGGCGATCGCCAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGAT                                          <  8:81923/148‑1
  GTGACCCAGGGCGAGCCGGGCATGGAGCTGGCGATCGCCAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGT                                       >  6:283403/1‑149
                                      GCCAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGTCGGCAGGTGGCCGAAGCGCAACGCGCCCATCATCAG   <  5:283403/149‑1
                                                                                TCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGTCGGCAGGTGGCCGAAGCGCAACGCGCCCATCATCAGG  <  3:237754/108‑1
                                                                                TCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGTCGGCAGGTGGCCGAAGCGCAACGCGCCCATCATCAGG  >  4:237754/1‑108
                                                                                                                                                                                            
GGGTGACCCAGGGCGAGCCGGGCATGGAGCTGGCGATCGCCAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1151616‑1151765
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatggTCGGCAGGTGGCCGAAGCGCAACGCGCCCATCATCAGG  <  NC_002947/1151792‑1151755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.