New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 115176550 (0.930)3 (0.060) 3/254 NT 5.6% coding (490/1827 nt) edd phosphogluconate dehydratase
?NC_002947 = 1151792 53 (1.020)coding (517/1827 nt) edd phosphogluconate dehydratase

GTGACCCAGGGCGAGCCGGGCATGGAGCTGGCGATCGCCAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGAAGGCAAGGCCAGCCGCGAAGAGCTGTTGGAGTCCGAGATG  >  NC_002947/1151618‑1151911
                                                                                                                                                    |                                                                                                                                                  
gTGACCCAGGGCGAGCCGGGCATGGAGCTGGCGATCGCCAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGt                                                                                                                                                   >  6:283403‑M1/1‑148 (MQ=255)
          gCGAGCCGGGCATGGAGCTGGCGATCGCCAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTgcgc                                                                                                                                         >  3:127039/1‑149 (MQ=255)
             aGCCGGGCATGGAGCTGGCGATCGCCAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCCGTCCCCGGCCTGATGATGGGCGCGTTGCGCtt                                                                                                                                       <  1:212446/149‑1 (MQ=255)
               ccGGGCATGGAGCTGGCGATCGCCAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCgg                                                                                                                                    >  2:115382/1‑149 (MQ=255)
                   gCATGGAGCTGGCGATCGCCAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCAc                                                                                                                                >  1:179203/1‑149 (MQ=255)
                                    gCCAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGtcggcaggtggccgaagcgcaacgcgcccatcatcag                                                                                                               <  5:283403‑M1/149‑38 (MQ=255)
                                     ccAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTc                                                                                                              >  6:197685/1‑149 (MQ=255)
                                     ccAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTc                                                                                                              >  2:154320/1‑149 (MQ=255)
                                       aGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTccc                                                                                                            >  4:66388/1‑149 (MQ=255)
                                       aGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGACTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCAACTTCGTccc                                                                                                            >  6:102844/1‑149 (MQ=255)
                                           gTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGt                                                                                                        >  2:18057/1‑149 (MQ=255)
                                            tGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTg                                                                                                       <  5:173007/149‑1 (MQ=255)
                                              aaGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTgg                                                                                                      <  1:310313/148‑1 (MQ=255)
                                              aaGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTgg                                                                                                      <  2:179203/148‑1 (MQ=255)
                                              aaGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGCCCCGGGTggg                                                                                                     <  7:59392/149‑1 (MQ=255)
                                               aGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACATCATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGc                                                                                                    <  3:5566/149‑1 (MQ=255)
                                                          tGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTcc                                                                                         >  5:321823/1‑149 (MQ=255)
                                                          tGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTcc                                                                                         >  8:76062/1‑149 (MQ=255)
                                                           gTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCg                                                                                        >  4:245605/1‑149 (MQ=255)
                                                            tCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCg                                                                                        <  3:245605/148‑1 (MQ=255)
                                                            tCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCg                                                                                        <  5:197685/148‑1 (MQ=255)
                                                              cACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGc                                                                                                                                   >  8:205006/1‑103 (MQ=255)
                                                              cACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGc                                                                                                                                   <  7:205006/103‑1 (MQ=255)
                                                               aCGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCa                                                                                     >  6:59391/1‑148 (MQ=255)
                                                                cggcggTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCAtc                                                                                   <  7:76062/149‑1 (MQ=255)
                                                                cggcggTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCAtc                                                                                   <  4:127039/149‑1 (MQ=255)
                                                                   cggTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGCCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTcc                                                                                <  5:334860/149‑1 (MQ=255)
                                                                        gcgcTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCcaacaa                                                                           <  1:18057/149‑1 (MQ=255)
                                                                            tGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAAAGGTTTCCGGCATCTCCAACAAg                                                                          >  1:304536/1‑146 (MQ=255)
                                                                              tCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGtcggcaggtggccgaagcgcaacgcgcccatcatcagg                                                                                                              >  4:237754‑M1/1‑70 (MQ=255)
                                                                              tCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGtcggcaggtggccgaagcgcaacgcgcccatcatcagg                                                                                                              <  3:237754‑M1/108‑39 (MQ=255)
                                                                              tCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGaa                                                                     <  5:59391/149‑1 (MQ=255)
                                                                                gCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAgg                                                                   >  2:183405/1‑149 (MQ=255)
                                                                                  acaacaTGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGcc                                                                 >  4:103436/1‑149 (MQ=255)
                                                                                   caacaTGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCg                                                                <  3:66388/149‑1 (MQ=255)
                                                                                          ttCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTgc                                                          <  1:115382/148‑1 (MQ=255)
                                                                                                  ggCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAgcgc                                                  >  8:276554/1‑148 (MQ=255)
                                                                                                     aCTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCAtct                                                                                  <  2:10674/113‑1 (MQ=255)
                                                                                                     aCTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCAtct                                                                                  >  1:10674/1‑113 (MQ=255)
                                                                                                     aCTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATg                                              <  7:276554/149‑1 (MQ=255)
                                                                                                          tGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGaa                                         <  7:12259/149‑1 (MQ=255)
                                                                                                                gCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGaaggcaag                                   <  3:254680/149‑1 (MQ=255)
                                                                                                                     tGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGaaggc                                      >  2:93190/1‑141 (MQ=255)
                                                                                                                     tGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGaaggc                                      <  1:93190/141‑1 (MQ=255)
                                                                                                                        gACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGAAGGCAAGGCCAGCcg                           >  8:273135/1‑149 (MQ=255)
                                                                                                                             gATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGAAGGCAAGGCCAGCcgcg                         >  6:200973/1‑146 (MQ=255)
                                                                                                                             gATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGAAGGCAAGGCCAGCCGCGAag                      >  7:299571/1‑149 (MQ=255)
                                                                                                                               tCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGCAGGCCGATGTGCTCCAGCGCTATGCCGAAGGCACTGCAAGCCGCGAagag                    >  4:22663/1‑149 (MQ=255)
                                                                                                                               tCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGAAGGCAAGGCCAGCCGCGAagag                    >  2:6773/1‑149 (MQ=255)
                                                                                                                                  gTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGAAGGCAAGGCCAGCCGCGAAGAGCt                  <  7:273135/149‑1 (MQ=255)
                                                                                                                                     cccGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGAAGGCAAGGCCAGCCGCGAAGAGCTGtt               <  8:299571/149‑1 (MQ=255)
                                                                                                                                          ccTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGAccatcatcaggccggggacgatcttgtcgcagatgcccagcatgagtgccgcgtcgaacatgttgtgcga                                                   >  4:237754‑M2/1‑38 (MQ=255)
                                                                                                                                          ccTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGAccatcatcaggccggggacgatcttgtcgcagatgcccagcatgagtgccgcgtcgaacatgttgtgcga                                                   <  3:237754‑M2/108‑71 (MQ=255)
                                                                                                                                           cTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGAccatcatcaggccggggacgatcttgtcgcagatgcccagcatgagtgccgcgtcgaacatgttgtgcgacagcgctaccgccgtggacatcgcgatcacttcacggctggc         <  5:283403‑M2/149‑113 (MQ=255)
                                                                                                                                             gatgatGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGAAGGCAAGGCCAGCCGCGAAGAGCTGt                <  3:76868/140‑1 (MQ=255)
                                                                                                                                             gatgatGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGAAGGCAAGGCCAGCCGCGAAGAGCTGt                >  4:76868/1‑140 (MQ=255)
                                                                                                                                              atgatgGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGAAGGCAAGGCCAGCCGCGAAGAGCTGTTGGAGTCCg       <  6:321823/148‑1 (MQ=255)
                                                                                                                                                   gggCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGAAGGCAAGGCCAGCCGCGAAGAGCTGTTGGAGTCCGAGATg  >  4:319977/1‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GTGACCCAGGGCGAGCCGGGCATGGAGCTGGCGATCGCCAGCCGTGAAGTGATCGCGATGTCCACGGCGGTAGCGCTGTCGCACAACATGTTCGACGCGGCACTCATGCTGGGCATCTGCGACAAGATCGTCCCCGGCCTGATGATGGGCGCGTTGCGCTTCGGCCACCTGCCGACCATCTTCGTCCCGGGTGGGCCAATGGTTTCCGGCATCTCCAACAAGCAGAAGGCCGATGTGCGCCAGCGCTATGCCGAAGGCAAGGCCAGCCGCGAAGAGCTGTTGGAGTCCGAGATG  >  NC_002947/1151618‑1151911

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.