New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1366339 =	53 (0.980)	5 (0.100)	3/254	NT	9.1%	coding (361/711 nt)	PP_1191	S4 domain‑containing protein
	?	NC_002947	1366381 =	49 (0.950)					coding (319/711 nt)	PP_1191	S4 domain‑containing protein

CCAGCCGGCATGGACAGTGAAGATGCCCGCGCCAGCATGAACATGGGCAGCCTCAGCGAGGCCCACCGCGAAGGCGTGCGCGCCCTGCACGGGCATTTTGCCCGGCAGGCCTGCGTGGCACCGCTGGAGCGTGGCGCCAGCG‑‑GCC‑TGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1366489‑1366339 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCG  >  NC_002947/1366381‑1366526                                                                                                                                                                                                                                                                                                              CCAGCCGGCATGGACAGTGAAGATGCCCGCGCCAGCATGAACATGGGCAGCCTCAGCGAGGCCCACCGCGAAGGCGTGCGCGCCCTGCACGGGCATTTTGCCCGGCAGGCCTGCGTGGCACCGCTGGAGCGTGGCGCCAGCG‑‑GCC‑TG                                                                                                                                                        >  1:218578/1‑147                                                                                                             GCCTGCGTGGCACCGCTGGAGCGTGGCGCCAGCG‑‑GCC‑TGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGC                                          >  1:123697/1‑149                                                                                                               CTGCGTGGCACCGCTGGAGCGTGGCGCCAGGG‑‑GCC‑TGCAGGCCTGGCGGGCAAATTGCCCGTGCAGGGCGCGCACGGCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCGATG                                               <  1:314449/142‑1                                                                                                               CTGCGTGGCACCGCTGGAGCGTGGCGCAAGCG‑‑GCC‑TGCAGGCCTGCCGCGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGCCCATCTTCACTGACCATG                                               >  2:314449/1‑142                                                                                                                         CCGCTGGAGCGTGGCGCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCT                                         >  7:190633/1‑141                                                                                                                         CCGCTGGAGCGTGGCGCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCT                                         <  8:190633/141‑1                                                                                                                                                       CAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTC   <  4:11804/149‑1                                                                                                                                                        AGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCG  <  2:123697/149‑1                                                                                                                                                        AGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCCGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCG  <  4:309792/149‑1                                                                                                                                                                                                                                                                                                              CCAGCCGGCATGGACAGTGAAGATGCCCGCGCCAGCATGAACATGGGCAGCCTCAGCGAGGCCCACCGCGAAGGCGTGCGCGCCCTGCACGGGCATTTTGCCCGGCAGGCCTGCGTGGCACCGCTGGAGCGTGGCGCCAGCG‑‑GCC‑TGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1366489‑1366339 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCG  >  NC_002947/1366381‑1366526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.