New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1366339 =53 (0.980)5 (0.100) 3/254 NT 9.1% coding (361/711 nt) PP_1191 S4 domain‑containing protein
?NC_002947 1366381 = 49 (0.950)coding (319/711 nt) PP_1191 S4 domain‑containing protein

CTCGCGGTCATTGCGCATGGCCCCACGCGCCAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGC  >  NC_002947/1366193‑1366486
                                                                                                                                                  |                                                                                                                                                      
cgaaaccctggagccggtgaccctgctgctgaaccagccagccggcatggacagtgaagatgcccgcgccagcatgaacatgggcggcctcagcgaggcccaccgcgaaggcgtgcgcgccctgcacgggcattttgcccggcaggCCt                                                                                                                                                      <  4:309792‑M1/3‑1 (MQ=255)
cgaaaccctggagccggtgaccctgctgctgaaccagccagccggcatggacagtgaagatgcccgcgccagcatgaacatgggcagcctcagcgaggcccaccgcgaaggcgtgcgcgccctgcacgggcattttgcccggcaggCCt                                                                                                                                                      <  2:123697‑M1/3‑1 (MQ=255)
cTCGCGGTCATTGCGCATGGCCCCACGCGCCAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCt                                                                                                                                                      >  4:264727/1‑149 (MQ=255)
 tCGCTGTCAATGCGCATGGACCAACGCGCCAGGCGGTCCAGCGCCTGGGGGGTGGGTTCGCCGCGACCTTCACTGATGAACTCATGCTCCCGGCGACGCAGGTCGGAGTCGATCTTGAGGGAGAGCCGCCAGTCGTGGGTAATCACCt                                                                                                                                                      >  6:278403/1‑148 (MQ=255)
 gaaaccctggagccggtgaccctgctgctgaaccagccagccggcatggacagtgaagatgcccgcgccagcatgaacatgggcagcctcagcgaggcccaccgcgaaggcgtgcgcgccctgcacgggcattttgcccggcaggCCTg                                                                                                                                                     <  4:11804‑M1/4‑1 (MQ=255)
         aTTGCGCATGGCCCCACGCGCCAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGc                                                                                                                                          >  1:124613/1‑149 (MQ=255)
                aTGGCCCCACGCGCCAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGgcgc                                                                                                                                    >  8:107648/1‑148 (MQ=255)
                        aCGCGCCAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTc                                                                                                                             >  6:125087/1‑147 (MQ=255)
                          gcgcCAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCAACGCTCCAGc                                                                                                                         >  6:28593/1‑149 (MQ=255)
                             ccAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGt                                                                                                                      <  3:298611/149‑1 (MQ=255)
                             ccAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGt                                                                                                                      <  2:197670/149‑1 (MQ=255)
                             ccAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGt                                                                                                                      >  8:10554/1‑149 (MQ=255)
                             ccAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGt                                                                                                                      <  1:139246/149‑1 (MQ=255)
                              cAGGCGTTCCAGCGCCTGGGGGGTGGTGTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTg                                                                                                                     <  1:292636/149‑1 (MQ=255)
                                 gCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCa                                                                                                                  <  7:10554/149‑1 (MQ=255)
                                       cAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAgg                                                                                                            <  4:235243/149‑1 (MQ=255)
                                       cAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAgg                                                                                                            >  4:12598/1‑149 (MQ=255)
                                       agccggcatggacagtgaagatgcccgcgccagcatgaacatgggcagcctcagcgaggcccaccgcgaaggcgtgcgcgccctgcacgggcattttgcccggcaggCCTGCGTGGCACCGCTGGCGCCACGCTCCAGCgg                                                                                                                       >  7:190633‑M1/108‑141 (MQ=255)
                                       agccggcatggacagtgaagatgcccgcgccagcatgaacatgggcagcctcagcgaggcccaccgcgaaggcgtgcgcgccctgcacgggcattttgcccggcaggCCTGCGTGGCACCGCTGGCGCCACGCTCCAGCgg                                                                                                                       <  8:190633‑M1/34‑1 (MQ=255)
                                        gccggcatggacagtgaagatgcccgcgccagcatgaacatgggcagcctcagcgaggcccaccgcgaaggcgtgcgcgccctgcacgggcattttgcccggcaggCCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGc                                                                                                           >  1:123697‑M1/107‑149 (MQ=255)
                                        aGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGc                                                                                                           >  7:283966/1‑149 (MQ=255)
                                             catggtcagtgaagatgggcgcgccagcatgaacatgggcagcctcagcgaggcccaccgcgaaggcgtgcgcgccctgcacgggcattttgcgcggcaggCCTGCAGGC‑‑CGCTTGCGCCACGCTCCAGCGGTGCCACGCAg                                                                                                             >  2:314449‑M1/102‑142 (MQ=255)
                                             catcgacagtgaagatgcccgcgccagcatgaacatgggcagcctcagcgaggcccaccgcgaagccgtgcgcgccctgcacgggcaatttgcccgccaggCCTGCAGGC‑‑CCCTGGCGCCACGCTCCAGCGGTGCCACGCAg                                                                                                             <  1:314449‑M1/41‑1 (MQ=255)
                                                 ggggTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCggg                                                                                                   >  6:191045/1‑148 (MQ=255)
                                                      ggtTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAAt                                                                                             >  1:104075/1‑149 (MQ=255)
                                                       gtTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATg                                                                                            >  2:218578/1‑149 (MQ=255)
                                                        tttCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGc                                                                                           <  5:301734/149‑1 (MQ=255)
                                                              cgcgCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTg                                                                                      >  5:228122/1‑148 (MQ=255)
                                                                 gcACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAgg                                                                                  <  3:12598/149‑1 (MQ=255)
                                                                   aCTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGgc                                                                                <  7:107648/149‑1 (MQ=255)
                                                                      tCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGgcgcg                                                                             >  7:296762/1‑149 (MQ=255)
                                                                          tgatgaACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACg                                                                         >  3:288196/1‑149 (MQ=255)
                                                                                    cTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTcgcg                                                                 <  2:104075/147‑1 (MQ=255)
                                                                                    cTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGt                                                               >  1:192055/1‑149 (MQ=255)
                                                                                        tCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGcc                                                                       <  3:73471/137‑1 (MQ=255)
                                                                                        tCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGcc                                                                       >  4:73471/1‑137 (MQ=255)
                                                                                        tCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGc                                                           >  3:309792/1‑149 (MQ=255)
                                                                                        tCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGc                                                           <  8:296762/149‑1 (MQ=255)
                                                                                          cAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGc                                                           <  6:228122/147‑1 (MQ=255)
                                                                                             gCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGc                                                      >  3:11804/1‑149 (MQ=255)
                                                                                                aCGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCt                                                     >  4:282463/1‑147 (MQ=255)
                                                                                                aCGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGa                                                   <  3:264727/149‑1 (MQ=255)
                                                                                                aCGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGa                                                   <  2:124613/149‑1 (MQ=255)
                                                                                                aCGCAGGTAGGCCTCGATCTTGAGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCAGGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGa                                                   <  8:301405/149‑1 (MQ=255)
                                                                                                         ggCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCa                                          >  2:35137/1‑149 (MQ=255)
                                                                                                           ccTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCAc                                                                          <  4:89363/115‑1 (MQ=255)
                                                                                                           ccTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCAc                                                                          >  3:89363/1‑115 (MQ=255)
                                                                                                            cTCGATCTTGCGGGATACCCGCCTGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACCCCCCAGCGGGGCCACGATTGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGt                                       <  1:276571/149‑1 (MQ=255)
                                                                                                            cTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGccc                                           <  6:261737/145‑1 (MQ=255)
                                                                                                            cTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCaag                                        >  5:261737/1‑146 (MQ=255)
                                                                                                               gATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGtt                                      <  5:191045/147‑1 (MQ=255)
                                                                                                               gATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTc                                     <  3:282463/148‑1 (MQ=255)
                                                                                                                       gggATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGgcg                            >  6:105394/1‑149 (MQ=255)
                                                                                                                        ggATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGgcgc                           <  2:237899/149‑1 (MQ=255)
                                                                                                                             cccGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGc                       <  5:28593/148‑1 (MQ=255)
                                                                                                                              ccGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGc                                                                                                           <  5:159685/63‑1 (MQ=255)
                                                                                                                              ccGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGc                                                                                                           >  6:159685/1‑63 (MQ=255)
                                                                                                                              ccGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCAt                     >  2:25629/1‑149 (MQ=255)
                                                                                                                              ccGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCAACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTAATGCTGGCGCGGGCa                      >  2:25631/1‑148 (MQ=255)
                                                                                                                                     tCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCa                >  3:312408/1‑147 (MQ=255)
                                                                                                                                     tCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCa                <  4:312408/147‑1 (MQ=255)
                                                                                                                                     tCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACt              <  2:192055/149‑1 (MQ=255)
                                                                                                                                          ggTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTc           <  1:35137/147‑1 (MQ=255)
                                                                                                                                               acacCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCg    >  2:172090/1‑149 (MQ=255)
                                                                                                                                                 acCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCAt                     >  1:341058/1‑130 (MQ=255)
                                                                                                                                                 acCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCAt                     <  2:341058/130‑1 (MQ=255)
                                                                                                                                                 acCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCggc  <  4:272156/149‑1 (MQ=255)
                                                                                                                                                 acCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCggc  >  2:162100/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                      
CTCGCGGTCATTGCGCATGGCCCCACGCGCCAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCTGCAGGC‑‑CGCTGGCGCCACGCTCCAGCGGTGCCACGCAGGCCTGCCGGGCAAAATGCCCGTGCAGGGCGCGCACGCCTTCGCGGTGGGCCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGC  >  NC_002947/1366193‑1366486

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.