| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1374458 | 28 (0.520) | 3 (0.060) | 3/250 | NT | 9.8% | coding (78/1911 nt) | kup | potassium transport system protein Kup |
| ? | NC_002947 | = 1374490 | 29 (0.570) | coding (110/1911 nt) | kup | potassium transport system protein Kup | |||||
GCCGGGGTACCTTCCAGGGCCTGGTGGCAGATTGATTACCAAGGGCCGTGATGGCCGTTTGCGGGAGTGGTCGATGGTTCAGGCAAGCAGTCACGCTGAGAGCGGGCACGAGGGGAAGCAGGGGGCATCGCGGTCGGTGGGCCTGCTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1374308‑1374458‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggtgCCGATATCGCCATAAACCACCCCGACCGCCGCCACCAGCAGGCCCACCGACCGCGATGCCCCCTGCTTCCCCTCGTGCCCGCTCTCAGCGTGACTGCTTGCCTGAACCATCGACCACTCCCGCAAACGGCCATCACGGCCCT < NC_002947/1374490‑1374349 GCCGGGGTACCTTCCAGGGCCTGGTGGCAGATTGATTACCAAGGGCCGTGATGGCCGTTTGCGGGAGTGGTCGATGGTTCAGGCAAGCAGTCACGCTGAGAGCGGGCACGAGGGGAAGCAGGGGGCATCGCGGTCGGTGGGCCTGCTGG < 3:280092/149‑1 GTACCTTCCAGGGCCTGGTGGCAGATTGATTACCAAGGGCCGTGATGGCCGTTTGCGGGAGTGGTCGATGGTTCAGGCAAGCAGTCACGCTGAGAGCGGGCACGAGGGGAAGCAGGGGGCATCGCGGTCGGTGGGCCTGC > 1:40860/1‑140 GTACCTTCCAGGGCCTGGTGGCAGATTGATTACCAAGGGCCGTGATGGCCGTTTGCGGGAGTGGTCGATGGTTCAGGCAAGCAGTCACGCTGAGAGCGGGCACGAGGGGAAGCAGGGGGCATCGCGGTCGGTGGGCCTGC < 2:40860/140‑1 AGGGCCGTGATGGCCGTTTGCGGGAGTGGGCGATGGTTCAGGCAAGCAGTCACGCTGAGAGCGGGCACGAGGGGAAGCAGGGGGCATCGCGGTCGGTGGGCCTGCTGGTGCCGATATCGCCATAAACCACCCCGACCGCCGCCACCAGC < 2:330067/149‑1 GATGGTTCAGGCAAGCAGTCACGCTGAGAGCGGGCACGAGGGGAAGCAGGGGGCATCGCGGTCGGTGGGCCTGCTGGTGCCGATATCGCCATAAACCACCCCGACCGCCGCCACCAGCAGG > 7:251814/1‑121 GATGGTTCAGGCAAGCAGTCACGCTGAGAGCGGGCACGAGGGGAAGCAGGGGGCATCGCGGTCGGTGGGCCTGCTGGTGCCGATATCGCCATAAACCACCCCGACCGCCGCCACCAGCAGG < 8:251814/121‑1 GCTGGTGCCGATATCGCCATAAACCACCCCGACCGCCGCCACCAGCAGGCCCACCGACCGCGATGCCCCCTGCTTCCCCTCGTGCCCGCTCTCAGCGTGACTGCTTGCCTGACCCATCGACCACTCCCGCAAACGGCCATCACGGCCCT > 3:36606/1‑149 GCCGGGGTACCTTCCAGGGCCTGGTGGCAGATTGATTACCAAGGGCCGTGATGGCCGTTTGCGGGAGTGGTCGATGGTTCAGGCAAGCAGTCACGCTGAGAGCGGGCACGAGGGGAAGCAGGGGGCATCGCGGTCGGTGGGCCTGCTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1374308‑1374458‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggtgCCGATATCGCCATAAACCACCCCGACCGCCGCCACCAGCAGGCCCACCGACCGCGATGCCCCCTGCTTCCCCTCGTGCCCGCTCTCAGCGTGACTGCTTGCCTGAACCATCGACCACTCCCGCAAACGGCCATCACGGCCCT < NC_002947/1374490‑1374349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |