New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1411164	54 (1.000)	3 (0.060)	3/254	NT	5.9%	coding (771/1437 nt)	PP_1232	hypothetical protein
	?	NC_002947	= 1411189	44 (0.850)					coding (746/1437 nt)	PP_1232	hypothetical protein

CCAAGGCCAGGCCATAACGTGCGGCGTCCAGCTTTGGGTCTTCGTCCAGTTGGGCGCGGAAGCGCTTGGCGGCAAGCCCCGGTGTGCCCTCGTAGATCAGTGCCACCCGGGCGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1411013‑1411164 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccGTAACCGCGCCGACCAGGCGCCCAAGGGTGGCATTGAAGACAGCATGCGCTACCAACTGATCCGCGCCCGGGTGGCACTGATCTACGAGGGCACACCGGGGCTTGCCGCCAAGCGCTTCCGCGCCCAACTGGACGAAGACCCAAAGCT  <  NC_002947/1411189‑1411042                                                                                                                                                                                                                                                                                                              CCAAGGCCAGGCCATAACGTGCGGCGTCCAGCTTTGGGTCTTCGTCCAGTTGGGCGCGGAAGCGCTTGGCGGCAAGCCCCGGTGTGCCCTCGTAGATCAGTGCCACCCGGGCGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCA                                                                                                                                                         >  8:242885/1‑149                                         TTCGTCCAGTTGGGCGCGGAAGCGCTTGGCGGCAAGCCCCGGTGTGCCCTCGTAGATCAGTGCCACCCGGGCGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCCGTAACCGCGCCGACCAGGCGCCCAAGGGTGGCATTG                                                                                                                  >  2:288188/1‑148                                           CGTCCAGTTGGGCGCGGAAGCGCTTGGCGGCAAGCCCCGGTGTGCCCTCGTAGATCAGTGCCACCCGGGCGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCCGTAACCGCGCCGACCAGGCGCCCAAGGGTGGCATTGAA                                                                                                                <  4:295963/148‑1                                               CAGTTGGGCGCGGAAGCGCTTGGCGGCAAGCCCCGGTGTGCCCTCGTAGATCAGTGCCACCCGGGCGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCCGTAACCGCGCCGACCAGGCGCCCAAGGGTGGCATTGAAGACA                                                                                                            <  1:288188/148‑1                                                                                                                                                     ACCCGTAACCGCGCCGACCAGGCGCCCAAGGGTGGCATTGAAGACAGCATGCGCTACCAACTGATCCGCGCCCGGGTGGCACTGATCTACGAGGGCACACCGGGGCTTGCCGCCAAGCGCTTCCGCGCCCAACTGGACGAAGACCCAAA     <  1:244324/149‑1                                                                                                                                                     ACCCGTAACCGCGCCGACCAGGCGCCCAAGGGTGGCATTGAAGACAGCATGCGCTACCAACTGATCCGCGCCCGGGTGGCACTGATCTACGAGGGCACACCGGGGCTTGCCGCCAAGCGCTTCCGCGCCCAACTGGACGAAGACCCAAA     <  7:226776/149‑1                                                                                                                                                      CCCGTAACCGCGCCGACCAGGCGCCCAAGGGTGGCATTGAAGACAGCATGCGCTACCAACTGATCCGCGCCCGGGTGGCACTGATCTACGAGGGCACACCGGGGCTTGCCGCCAAGCGCTTCCGCGCCCAACTGGACGAAGACCCAAAG    >  4:10660/1‑149                                                                                                                                                        CGTAACCGCGCCGACCAGGCGCCCAAGGGTGGCATTGAAGACAGCATGCGCTACCAACTGATCCGCGCCCGGGTGGCACTGATCTACGAGGGCACACCGGGGCTTGCCGCCAAGCGCTTCCGCGCCCAACTGGACGAAGACCCAAAGCT  >  7:242885/1‑149                                                                                                                                                                                                                                                                                                              CCAAGGCCAGGCCATAACGTGCGGCGTCCAGCTTTGGGTCTTCGTCCAGTTGGGCGCGGAAGCGCTTGGCGGCAAGCCCCGGTGTGCCCTCGTAGATCAGTGCCACCCGGGCGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1411013‑1411164 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacccGTAACCGCGCCGACCAGGCGCCCAAGGGTGGCATTGAAGACAGCATGCGCTACCAACTGATCCGCGCCCGGGTGGCACTGATCTACGAGGGCACACCGGGGCTTGCCGCCAAGCGCTTCCGCGCCCAACTGGACGAAGACCCAAAGCT  <  NC_002947/1411189‑1411042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.