| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1451149 | 45 (0.840) | 4 (0.080) | 4/250 | NT | 8.0% | coding (333/906 nt) | PP_1270 | LysR family transcriptional regulator |
| ? | NC_002947 | = 1451175 | 50 (0.980) | coding (359/906 nt) | PP_1270 | LysR family transcriptional regulator | |||||
TACGCCCCGTGCGTTGGCCCTGCGCGAGCAGGTGCATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1450996‑1451149‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgccTGGGCCAGCATCATGCGCAGCAGCTGGGCGCCGTAAAGGGCAATGAACAAATCATTGGTGCGGATGTTGAAGGCACGGTCCAGGTTCACCAGGTCGACATCGTCACGGCTGCGGAACACCTGCCCGGCCTGCTCCACCAGGCCATGC < NC_002947/1451175‑1451029 TACGCCCCGTGCGTTGGCCCTGCGCGAGCAGGTGCATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACG > 2:324507/1‑149 CGCCCCGTGCGTTGGCCCTGCGCGAGCAGGTGCATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGC < 7:107745/149‑1 CGTGCGTTGGCCCTGCGCGAGCAGGTGCATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCC > 5:258902/1‑147 GCGAGCAGGTGCATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCTGGGCCAGCATCATGCG > 4:139864/1‑148 TGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCTGGGCCAGCATCATGCGCAGCAGCTGGGCGC < 2:45647/149‑1 GTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCAACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCTGGGCCAGCATCATGCGCAGCAGCTGGGCGCCGTAAAG < 6:149083/149‑1 TGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCTGGGCCAGCATCATGCGCAGCAGCTGGGCGCCGTAAAGG < 3:139864/149‑1 CCTGGGCCAGCATCATGCGCAGCAGCTGGGCGCCGTAAAGGGCAATGAACAAATCATTGGTGCGGATGTTGAAGGCACGGTCCAGGTTCACCAGGTCGACATCGTCACGGCTGCGGAACACCTGCCCGGCCTGCTCCACCAGGCCATGC < 8:316220/149‑1 TACGCCCCGTGCGTTGGCCCTGCGCGAGCAGGTGCATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1450996‑1451149‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgccTGGGCCAGCATCATGCGCAGCAGCTGGGCGCCGTAAAGGGCAATGAACAAATCATTGGTGCGGATGTTGAAGGCACGGTCCAGGTTCACCAGGTCGACATCGTCACGGCTGCGGAACACCTGCCCGGCCTGCTCCACCAGGCCATGC < NC_002947/1451175‑1451029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |