New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 145114945 (0.840)4 (0.080) 4/250 NT 8.0% coding (333/906 nt) PP_1270 LysR family transcriptional regulator
?NC_002947 = 1451175 50 (0.980)coding (359/906 nt) PP_1270 LysR family transcriptional regulator

TACGCCCCGTGCGTTGGCCCTGCGCGAGCAGGTGCATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1450996‑1451149
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgccTGGGCCAGCATCATGCGCAGCAGCTGGGCGCCGTAAAGGGCAATGAACAAATCATTGGTGCGGATGTTGAAGGCACGGTCCAGGTTCACCAGGTCGACATCGTCACGGCTGCGGAACACCTGCCCGGCCTGCTCCACCAGGCCATGC  <  NC_002947/1451175‑1451029
                                                                                                                                                                                                                                                                                                             
TACGCCCCGTGCGTTGGCCCTGCGCGAGCAGGTGCATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACG                                                                                                                                                          >  2:324507/1‑149
  CGCCCCGTGCGTTGGCCCTGCGCGAGCAGGTGCATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGC                                                                                                                                                        <  7:107745/149‑1
       CGTGCGTTGGCCCTGCGCGAGCAGGTGCATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCC                                                                                                                                                     >  5:258902/1‑147
                       GCGAGCAGGTGCATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCTGGGCCAGCATCATGCG                                                                                                                                    >  4:139864/1‑148
                                    TGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCTGGGCCAGCATCATGCGCAGCAGCTGGGCGC                                                                                                                      <  2:45647/149‑1
                                           GTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCAACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCTGGGCCAGCATCATGCGCAGCAGCTGGGCGCCGTAAAG                                                                                                               <  6:149083/149‑1
                                            TGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCCTGGGCCAGCATCATGCGCAGCAGCTGGGCGCCGTAAAGG                                                                                                              <  3:139864/149‑1
                                                                                                                                                        CCTGGGCCAGCATCATGCGCAGCAGCTGGGCGCCGTAAAGGGCAATGAACAAATCATTGGTGCGGATGTTGAAGGCACGGTCCAGGTTCACCAGGTCGACATCGTCACGGCTGCGGAACACCTGCCCGGCCTGCTCCACCAGGCCATGC  <  8:316220/149‑1
                                                                                                                                                                                                                                                                                                             
TACGCCCCGTGCGTTGGCCCTGCGCGAGCAGGTGCATGGCCTGGTGGAGCAGGCCGGGCAGGTGTTCCGCAGCCGTGACGATGTCGACCTGGTGAACCTGGACCGTGCCTTCAACATCCGCACCAATGATTTGTTCATTGCCCTTTACGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1450996‑1451149
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgccTGGGCCAGCATCATGCGCAGCAGCTGGGCGCCGTAAAGGGCAATGAACAAATCATTGGTGCGGATGTTGAAGGCACGGTCCAGGTTCACCAGGTCGACATCGTCACGGCTGCGGAACACCTGCCCGGCCTGCTCCACCAGGCCATGC  <  NC_002947/1451175‑1451029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.