| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1558475 | 59 (1.100) | 4 (0.080) | 3/248 | NT | 6.6% | coding (426/732 nt) | PP_1369 | hypothetical protein |
| ? | NC_002947 | = 1558529 | 57 (1.130) | coding (372/732 nt) | PP_1369 | hypothetical protein | |||||
CCCGCCAGCGCTGGCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1558321‑1558475‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcaggGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATACACCAGTACACCTCAGCATCTGTACCGCTTGCCAGACTTTACGGCGATTGATGCGCCAGGCCTGGTCTGGAGCGC < NC_002947/1558529‑1558386 CCCGCCAGCGCTGGCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGT < 1:265625/149‑1CCCGCCAGCGCTGGCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGT < 5:281700/149‑1 CCAGCGCTGGCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCA < 7:47164/149‑1 TTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACG > 2:233680/1‑149 CAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTG > 6:166053/1‑148 GACCAGGCCTGTCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGTAAGCGCTGTGCCGCCTGCCACTGAAA < 1:233680/149‑1 GACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAA < 5:166053/149‑1 TGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATACACCAGTACACCTCAGCATCTGTACCGCTTGCCAGACTTTACGGCGATTGATGCGCCAGGCCTGGTCTGGA < 6:183266/147‑1 GCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATACACCAGTACACCTCAGCATCTGTACCGCTTGCCAGACTTTACGGCGATTGATGCGCCAGGCCTGGTCTGGAGCGC > 7:273774/1‑149 CCCGCCAGCGCTGGCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1558321‑1558475‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcaggGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACTGAAATACACCAGTACACCTCAGCATCTGTACCGCTTGCCAGACTTTACGGCGATTGATGCGCCAGGCCTGGTCTGGAGCGC < NC_002947/1558529‑1558386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |