New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1558475	59 (1.100)	4 (0.080)	3/248	NT	6.6%	coding (426/732 nt)	PP_1369	hypothetical protein
	?	NC_002947	= 1558529	57 (1.130)					coding (372/732 nt)	PP_1369	hypothetical protein

GCGCTGGCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTC  >  NC_002947/1558328‑1558618                                                                                                                                                    |                                                                                                                                                    gcgcTGGCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAggc                                                                                                                                                    <  4:306729/149‑1 (MQ=255)   gcTGGCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAggcgg                                                                                                                                                  <  3:188170/149‑1 (MQ=255)       gCATTGCCAGTCGCACAGCGTGCGTGAAAGTTTGCGACGCCATGCGCTCCGTGCGCTCCAGACCAGGCCTGGCGCATCAATCGACGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGcaca                                                                                                                                              <  1:51912/149‑1 (MQ=255)       gCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGca                                                                                                                                                >  1:201820/1‑147 (MQ=255)       gCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGca                                                                                                                                                <  1:231019/147‑1 (MQ=255)         aTTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAgc                                                                                                                                            >  7:33013/1‑149 (MQ=255)         aTTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAgc                                                                                                                                            >  7:151592/1‑149 (MQ=255)         aTTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAgc                                                                                                                                            >  2:73085/1‑149 (MQ=255)             ccAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCtt                                                                                                                                        <  2:148381/149‑1 (MQ=255)               aGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGc                                                                                                                                      >  8:8500/1‑149 (MQ=255)                gTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGcc                                                                                                                                     >  8:248419/1‑149 (MQ=255)                   gCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCcgcg                                                                                                                                  >  2:245604/1‑149 (MQ=255)                     acaGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGt                                                                                                                                 <  8:291877/148‑1 (MQ=255)                               ggACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCa                                                                                                                     <  4:212848/149‑1 (MQ=255)                                gACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTCCAGATGCTGAGGTGTACTGGGGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCAt                                                                                                                    <  1:62011/149‑1 (MQ=255)                                gACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCAt                                                                                                                    <  8:203700/149‑1 (MQ=255)                                  cAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGa                                                                                                                  <  7:8500/149‑1 (MQ=255)                                   aGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAg                                                                                                                 >  4:142631/1‑149 (MQ=255)                                    gTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGc                                                                                                                <  7:248419/149‑1 (MQ=255)                                     tttGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGgtttgtcgcaccggcctggctcatgagccagggcacg                                                                                                                >  2:233680‑M1/1‑112 (MQ=255)                                            cGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCgg                                                                                                       <  1:135234/149‑1 (MQ=255)                                              ccATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTg                                                                                                     <  8:59415/149‑1 (MQ=255)                                               cATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGc                                                                                                    >  4:220512/1‑149 (MQ=255)                                               cATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGc                                                                                                    <  3:220512/149‑1 (MQ=255)                                                           gcgcTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACcctgc                                                                                        >  7:273774‑M2/1‑144 (MQ=255)                                                               tCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACcctgcca                                                                                      <  6:183266‑M2/147‑8 (MQ=255)                                                               tCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCcaca                                                                                    >  2:143690/1‑149 (MQ=255)                                                                 cAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGgtttgtcgcaccggcctggctcatgagccagggcacgcggcaagcgctgtgccgcctgccactg                                                                                     >  6:166053‑M1/1‑84 (MQ=255)                                                                 cAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAg                                                                                   <  8:152370/148‑1 (MQ=255)                                                                 cAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAg                                                                                   <  1:73085/148‑1 (MQ=255)                                                                   gACCAGGCCTGTCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGgtttgtcgcaccggcctggctcatgagccagggcacgcggtaagcgctgtgccgcctgccactgaaa                                                                                  <  1:233680‑M1/149‑68 (MQ=255)                                                                   gACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGgtttgtcgcaccggcctggctcatgagccagggcacgcggcaagcgctgtgccgcctgccactgaaa                                                                                  <  5:166053‑M1/149‑68 (MQ=255)                                                                      cAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCAcc                                                                             >  8:80662/1‑149 (MQ=255)                                                                         gCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAgc                                                                                                                                            <  6:59861/85‑1 (MQ=255)                                                                         gCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAgc                                                                                                                                            >  5:59861/1‑85 (MQ=255)                                                                         gCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCtt                                                                          >  5:240829/1‑149 (MQ=255)                                                                          ccTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTg                                                                         <  8:33013/149‑1 (MQ=255)                                                                              gcgcATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTcc                                                                     >  2:185880/1‑149 (MQ=255)                                                                                gcATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTc                                                                   <  6:240829/149‑1 (MQ=255)                                                                                     aaTCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AAc                                                              <  5:56417/148‑1 (MQ=255)                                                                                      aTCGCCGTAAAGTCTGGCAAGGGGTACAGATGCTGAGGTTTACTGGTTTATTTCAGTGGCCGGCGGCACAGCGCTTGCCGCGTGCCCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACa                                                             <  1:102377/149‑1 (MQ=255)                                                                                            gTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAg                                                     <  2:40822/149‑1 (MQ=255)                                                                                             tAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCa                                                      <  2:320186/147‑1 (MQ=255)                                                                                             tAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCa                                                      >  1:320186/1‑147 (MQ=255)                                                                                               aaGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCTGGcc                                                  <  7:80662/149‑1 (MQ=255)                                                                                                 gTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGTCCACCCTTGGTCCTCG‑AACAGTG‑ccgaaact                                                 >  1:122854/1‑142 (MQ=255)                                                                                                  tCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCcctc                                               <  3:142631/149‑1 (MQ=255)                                                                                                    tGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGc                                                   <  5:45374/143‑1 (MQ=255)                                                                                                    tGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGc                                                   >  6:45374/1‑143 (MQ=255)                                                                                                     ggCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTg                                            >  5:193833/1‑149 (MQ=255)                                                                                                     ggCAAGCGGTACAGAGGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGTGCCAG‑GCCGGTGTGTCAAACCCTGCCACAGGCCACCATTGGTCCTCG‑AACAGTG‑CCAGGCcctcct                                             >  8:285883/1‑148 (MQ=255)                                                                                                              tACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCggg                                    >  3:243187/1‑148 (MQ=255)                                                                                                                 aGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAg                                >  2:267882/1‑149 (MQ=255)                                                                                                                  gATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAGTGCCGGTGCGACAAACCCTGCCACAGGCCAccc                                                                            <  1:208274/107‑1 (MQ=255)                                                                                                                  gATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCAccc                                                                            >  2:208274/1‑106 (MQ=255)                                                                                                                   ttGCTGATGTGTACTGGTGTATTTCAGTGGCAGGAGTCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCGTGGCACAGGCCTCGCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAgc                               <  2:201820/147‑1 (MQ=255)                                                                                                                     gCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACATCGCTTGCCGAGTG‑CCCTGGCTCATGCGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑ACAGGCCCTACGGTAGCCGGGTAAGCGCt                            >  1:182892/1‑149 (MQ=255)                                                                                                                      cTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAGCGCt                            <  1:185880/148‑1 (MQ=255)                                                                                                                       tGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAGCGCTTc                          >  7:271105/1‑149 (MQ=255)                                                                                                                          ggTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGtt                       <  6:193833/149‑1 (MQ=255)                                                                                                                           gtgtACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGAAAGCGCTTCGTtc                      <  5:183266/149‑1 (MQ=255)                                                                                                                             gtACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGAGTC‑CCATGGCTCATGAGCAAG‑GCAGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AAAAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAGCTCTTCGTtct                     >  8:60939/1‑148 (MQ=255)                                                                                                                                     gtATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGc            >  7:226307/1‑149 (MQ=255)                                                                                                                                       aTTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTg          >  2:119375/1‑149 (MQ=255)                                                                                                                                        tttCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACcctgccactgaaatacaccagtacacctcagcatctgtaccgcttgccagactttacggcgattgatgcgccaggcctggtc           <  5:166053‑M2/149‑83 (MQ=255)                                                                                                                                        tttCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTg          >  4:145112/1‑148 (MQ=255)                                                                                                                                        tttCAGTGGCAGGCGGCACAGCGCTTACCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACcctgccactgaaatacaccagtacacctcagcatctgtaccgcttgccagactttacggcgattgatgcgacaggcctggtc           <  1:233680‑M2/149‑83 (MQ=255)                                                                                                                                         ttCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTg          >  2:216768/1‑147 (MQ=255)                                                                                                                                          tCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTGCCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGt         <  1:245604/148‑1 (MQ=255)                                                                                                                                          tCAGTGGCAGGCGGCAAAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGAAGCCGGGAAAGCGCTTCGTTCTCATCAAGTCTg          >  3:48444/1‑146 (MQ=255)                                                                                                                                           cAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACcctgccactgaaatacaccagtacacctcagcatctgtaccgcttgccagactttacggcgattgatgcgccaggcctggtctg         >  6:166053‑M2/1‑64 (MQ=255)                                                                                                                                            aGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCGCTACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGa      <  1:267882/149‑1 (MQ=255)                                                                                                                                              tGGCAGGgtttgtcgcaccggcctggctcatgagccagggcacgcggcaagcgctgtgccgcctgccactgaaatacaccagtacacctcagcatctgtaccgcttgccagactttacggcgattgatgcgccaggcctggtctgga         <  6:183266‑M1/147‑141 (MQ=255)                                                                                                                                                gCAGGgtttgtcgcaccggcctggctcatgagccagggcacgcggcaagcgctgtgccgcctgccactgaaatacaccagtacacctcagcatctgtaccgcttgccagactttacggcgattgatgcgccaggcctggtctggagcgc     >  7:273774‑M1/1‑5 (MQ=255)                                                                                                                                                  aGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTc  <  6:232009/146‑1 (MQ=255)                                                                                                                                                  aGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTc  >  5:232009/1‑146 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GCGCTGGCATTGCCAGTCGCACAGCGTGCGGGACAGTTTGCGACGCCATGCGCTCCGGGCGCTCCAGACCAGGCCTGGCGCATCAATCGCCGTAAAGTCTGGCAAGCGGTACAGATGCTGAGGTGTACTGGTGTATTTCAGTGGCAGGCGGCACAGCGCTTGCCGCGTG‑CCCTGGCTCATGAGCCAG‑GCCGGTGCGACAAACCCTGCCACAGGCCACCCTTGGTCCTCG‑AACAGTG‑CCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTC  >  NC_002947/1558328‑1558618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.