New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1607270 | 40 (0.740) | 3 (0.060) | 3/250 | NT | 8.2% | coding (264/888 nt) | PP_1408 | (R)‑3‑hydroxydecanoyl‑ACP:CoA transacylase |
? | NC_002947 | = 1607299 | 29 (0.570) | coding (235/888 nt) | PP_1408 | (R)‑3‑hydroxydecanoyl‑ACP:CoA transacylase |
GATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGGTGCGCCAGCGCCAGCAGCGTGCTTGCGCCACCCCACGAAAAAGACATCACGTGGTCTGCCTGGAAGTGCTCGATCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1607119‑1607270 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcagcAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGAGCACTTCCAGGCAGACCACGTGATGTCTTTTTCGTGGGGTGGCGCAAGCACGCTGCTGGCGCTGGCGCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTC < NC_002947/1607299‑1607153 GATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGGTGCGCCAGCGCCAGCAGCGTGCTTGCGCCACCCCACGAAAAAGACATCACGTGGTCTGCCTGGAAGTGCTCGAT > 5:177459/1‑148 AACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGGTGCGCCAGCGCCAGCAGCGTGCTTGCGCCACCCCACGAAAAAGACATCACGTGGTCTGCCTGGAAGTGCTCGATCAGCAAGGAGACCGAGGCGCATATCCTCCTTGAGCT > 4:57242/1‑149 AACTCACCACTGCCTTCTTCACGTACCGCGGCTGGTGCGCCAGCGCCAGCAGCGTGCTTGCGCCACCCCACGAAAAAGACATCACGTGGTCTGCCTGGAAGTGCTCGATCAGCAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATC < 3:57242/149‑1 CTCACCACTGCCTTCTTCACGTACCGCGGCTGGTGCGCCAGCGCCAGCAGCGTGCTTGCGCCACCCCACGAAAAAGACATCACGTGGTCTGCCTGGAAGTGCTCGATCAGCAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGA < 2:73627/149‑1 ATCAGCAAGGATACCGTGGCGCATATCCTCCTTGAGCTGATCGAGCACTTCCAGGCAGACCACGTGATGTCTTTTTCGTGGGGTGGCGCAAGCACGCTGCTGGCGCTGGCGCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGT < 5:2818/147‑1 TCAGCAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGAGCACTTCCAGGCAGACCACGTGATGTCTTTTTCGTGGGGTGGCGCAAGCACGCTGCTGGCGCTGGCG < 1:145379/110‑1 TCAGCAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGAGCACTTCCAGGCAGACCACGTGATGTCTTTTTCGTGGGGTGGCGCAAGCACGCTGCTGGCGCTGGCG > 2:145379/1‑110 GCAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGAGCACTTCCAGGCAGACCACGTGATGTCTTTTTCGTGGGGTGGCGCAAGCACGCTGCTGGCGCTGGCGCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTC > 2:42658/1‑149 GCAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGAGCACTTCCAGGCAGACCACGTGATGTCTTTTTCGTGGGGTGGCGCAAGCACGCTGCTGGCGCTGGCGCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGA < 1:305594/141‑1 GCAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGAGCACTTCCAGGCAGACCACGTGATGTCTTTTTCGTGGGGTGGCGCAAGCACGCTGCTGGCGCTGGCGCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGA > 2:305594/1‑141 GATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGGTGCGCCAGCGCCAGCAGCGTGCTTGCGCCACCCCACGAAAAAGACATCACGTGGTCTGCCTGGAAGTGCTCGATCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1607119‑1607270 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcagcAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGAGCACTTCCAGGCAGACCACGTGATGTCTTTTTCGTGGGGTGGCGCAAGCACGCTGCTGGCGCTGGCGCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTC < NC_002947/1607299‑1607153 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |