| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1612788 = | 49 (0.910) | 3 (0.060) | 3/254 | NT | 5.8% | coding (585/693 nt) | ung | uracil‑DNA glycosylase |
| ? | NC_002947 | 1612843 = | 51 (0.980) | coding (640/693 nt) | ung | uracil‑DNA glycosylase | |||||
ATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGCTCGAGGAAGCTGTTGGCACGGCTGAAATGCCCGCAACCGATGAACCCGCGATACGCCGACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1612940‑1612788‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcTTCCTCGAGCAGCGGGGGCTCGGGCCCATCGACTGGGCACTGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAA > NC_002947/1612843‑1612969 ATGAGCATGACGCCCTGAGCGATTGCGTACCCAACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGCTCGAGGAAGCTGTTGGCACGGCTGAAATGCCCGCAACCGATGAACCCGCGATACGCCGA < 8:264403/149‑1 AGGAAGCTGTTGGCACGGCTGAAATGCCCGCAACCGATGAACCCGCGATACGCCGACAGCTTCCTCGAGCAGCGGGGGCTCGGGCCCATCGACTGGGCACTGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTC > 7:294974/1‑142 AGGAAGCTGTTGGCACGGCTGAAATGCCCGCAACCGATGAACCCGCGATACGCCGACAGCTTCCTCGAGCAGCGGGGGCTCGGGCCCATCGACTGGGCACTGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTC < 8:294974/142‑1 GGAAGCTGTTGGCACGGCTGAAATGCCCGCAACCGATGAACCCGCGATACGCCGACAGCTTCCTCGAGCAGCGGGGGCTCGGGCCCATCGACTGGGCACTGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGT > 2:276693/1‑148 CTTCCTCGAGCAGCGGGGGCTCGGGCCCATCGACTGGGCACTGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAA < 5:305732/128‑1 CTTCCTCGAGCAGCGGGGGCTCGGGCCCATCGACTGGGCACTGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAA > 6:305732/1‑128 ATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGCTCGAGGAAGCTGTTGGCACGGCTGAAATGCCCGCAACCGATGAACCCGCGATACGCCGACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1612940‑1612788‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcTTCCTCGAGCAGCGGGGGCTCGGGCCCATCGACTGGGCACTGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAA > NC_002947/1612843‑1612969 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |