New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1942887	32 (0.590)	3 (0.060)	3/254	NT	8.7%	coding (53/1665 nt)	actP‑I	acetate permease
	?	NC_002947	= 1942920	32 (0.620)					coding (86/1665 nt)	actP‑I	acetate permease

GATCGTTTCGGCATTCGTCCTGACCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1942739‑1942887 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGTGCGAAGGCTCCGCAGGCCAATACGGCCAGGGCTTTGACTTGGCGAATCATTGTTGCGCCTCCTTCAGGATTTCCTTGTTCAGCTCATCGAATTCGCCGTTGGCGCGGCG  <  NC_002947/1942920‑1942776                                                                                                                                                                                                                                                                                                        GATCGTTTCGGCATTCGTCCTGACCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACC                                                                                                                                                   >  7:78226/1‑149                                     GCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGT                                                                                                               <  3:92405/149‑1                                                                    AACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGTGCGA                                                                                                           >  5:182127/1‑122                                                                    AACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGTGCGA                                                                                                           <  6:182127/122‑1                                                                                                                                                  CACCTCGCCGGTCAGGGCATCGGCGGCCCAGACGGCGGGTGCGAAGGCTCCGCAGGCCAATACGGCCAGGGCTTTGACTTGGCGAATCATTGTTGCGCCTCCTTCAGGATTTCCTTGTTCAGCTCATCGAATTCGCCGTTGGCGCGGCG  >  1:31478/1‑149                                                                                                                                                  CACCTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGTGCGAAGGCTCCGCAGGCCAATACGGCCAGGGCTTTGACTTGGCGAATCATTGTTGCGCCTCCTTCAGGATTTCCTTGTTCAGCTCATCGAATTCGCCGTTGGCGCGGCG  >  7:129235/1‑149                                                                                                                                                     CTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGTGCGAAGGCTCCGCAGGCCAATACGGCCAGGGCTTTGACTTGGCGAATCATTGTTGCGCCTCCTTCAGGATTTCCTT                                   <  1:170580/113‑1                                                                                                                                                     CTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGTGCGAAGGCTCCGCAGGCCAATACGGCCAGGGCTTTGACTTGGCGAATCATTGTTGCGCCTCCTTCAGGATTTCCTT                                   >  2:170580/1‑113                                                                                                                                                                                                                                                                                                        GATCGTTTCGGCATTCGTCCTGACCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1942739‑1942887 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccTCGCCGGTCAGGGCATCGGCGGCCCACACGGCGGGTGCGAAGGCTCCGCAGGCCAATACGGCCAGGGCTTTGACTTGGCGAATCATTGTTGCGCCTCCTTCAGGATTTCCTTGTTCAGCTCATCGAATTCGCCGTTGGCGCGGCG  <  NC_002947/1942920‑1942776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.