New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1942887	32 (0.590)	3 (0.060)	3/254	NT	8.7%	coding (53/1665 nt)	actP‑I	acetate permease
	?	NC_002947	= 1942920	32 (0.620)					coding (86/1665 nt)	actP‑I	acetate permease

GATCGTTTCGGCATTCGTCCTGACCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAACGCAACAAGTCGGCATCGGACT  >  NC_002947/1942739‑1943033                                                                                                                                                     |                                                                                                                                                   gATCGTTTCGGCATTCGTCCTGACCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACC                                                                                                                                                    >  7:78226‑M1/1‑149 (MQ=255)  aTCGTTTCGGCATTCGTCCTGACCGCCAACTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCAccc                                                                                                                                                   >  1:192044/1‑149 (MQ=255)      tttCGGCATTCGTCCTGACCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACccgccg                                                                                                                                               <  7:234356/149‑1 (MQ=255)          ggCATTCGTCCTGACCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGtgtg                                                                                                                                           >  7:202757/1‑149 (MQ=255)           gCATTCGTCCTGACCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTgg                                                                                                                                          <  8:78226/149‑1 (MQ=255)           gCATTCGTCCTGACCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTgg                                                                                                                                          <  5:95925/149‑1 (MQ=255)                 gTCCTGACCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGgccgc                                                                                                                                     <  4:292483/148‑1 (MQ=255)                 gTCCTGACCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTAAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGgccgcc                                                                                                                                    >  1:103063/1‑149 (MQ=255)                       aCCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGcc                                                                                                                              <  6:120402/149‑1 (MQ=255)                       aCCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGcc                                                                                                                              <  3:86944/149‑1 (MQ=255)                         cGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCt                                                                                                                            >  3:82377/1‑149 (MQ=255)                         cGCCATCTACGTGCGCCGCCCCAACGGCGAATTCGAGGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGACCTGGCCGTATTGGCCTGCGCAGCCTTCGCACACGCCGTGTCGGCCGCCCCTGCCCt                                                                                                                            >  1:67053/1‑149 (MQ=255)                           ccATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGa                                                                                                                          >  1:151210/1‑149 (MQ=255)                                     gcgccgcgccAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCtcgccggtcagggcatcggcggcccacacggcgggt                                                                                                                <  3:92405‑M1/149‑37 (MQ=255)                                      cgccgcgccAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAggtg                                                                                                               >  7:129235‑M2/1‑145 (MQ=255)                                      cgccgcgccAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTCTGGGCCGCCGATGCCCTGACCGGCGAggtg                                                                                                               >  1:31478‑M2/1‑145 (MQ=255)                                                    cGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCt                                                                                                 <  1:171500/149‑1 (MQ=255)                                                       aTTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTCGCCTGCGGAGCCTACGCACCCGCCGTGTGGCCCGCCGATGCCCTGACCGGCGAGCTGCAGAAACAACCGCTGaa                                                                                              >  7:184845/1‑149 (MQ=255)                                                                    aaCAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCtcgccggtcagggcatcggcggcccacacggcgggtgcga                                                                                                            <  6:182127‑M1/122‑41 (MQ=255)                                                                    aaCAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCtcgccggtcagggcatcggcggcccacacggcgggtgcga                                                                                                            >  5:182127‑M1/1‑82 (MQ=255)                                                                       aaGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAg                                                                                                                  <  1:170580‑M2/113‑2 (MQ=255)                                                                       aaGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAg                                                                                                                  >  2:170580‑M2/1‑112 (MQ=255)                                                                       aaGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCcgccatcgc                                                                               >  3:217207/1‑148 (MQ=255)                                                                                              acaaTGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCtt                                                       <  2:192044/149‑1 (MQ=255)                                                                                                aaTGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTgg                                                                    <  3:231478/134‑1 (MQ=255)                                                                                                aaTGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTgg                                                                    >  4:231478/1‑134 (MQ=255)                                                                                                    aTTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCAccc                                                  <  8:202757/148‑1 (MQ=255)                                                                                                       cGCCAAGTCCAATCCCTGGCCGTATTGGCCGGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGTAACATCCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCg                                               <  2:67053/148‑1 (MQ=255)                                                                                                          cAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCcgccatcgccat                                                                            >  8:163524/1‑116 (MQ=255)                                                                                                          cAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCcgccatcgccat                                                                            <  7:163524/116‑1 (MQ=255)                                                                                                           aaGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCAt                                           >  3:252971/1‑148 (MQ=255)                                                                                                                aaaGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGa                                                                                                           >  6:265511/1‑79 (MQ=255)                                                                                                                aaaGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTa                                     >  1:157054/1‑149 (MQ=255)                                                                                                                  aGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTAtt                                   >  8:140550/1‑149 (MQ=255)                                                                                                                      cTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGc                               <  2:151210/149‑1 (MQ=255)                                                                                                                          ccGTATTGGCCTGCGGAGCCTTCGCAGGCGCCGTGTGGGCAGCCGATGCCCTGACCGGGGAGGTGCAGAAACAACCGCTGAAGGGTTCCGGCATCGCCATGTTCGTGGCGTGCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTcc                           <  8:184845/149‑1 (MQ=255)                                                                                                                                  gCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAACGca                    >  4:111296/1‑148 (MQ=255)                                                                                                                                   ccTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAACGcaac                  <  7:140550/149‑1 (MQ=255)                                                                                                                                    cTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAACGcaac                  >  3:252669/1‑148 (MQ=255)                                                                                                                                             cTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAACGCAACAAGTCGGCAt        <  4:82377/149‑1 (MQ=255)                                                                                                                                               tCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAggtgcgaaggctccgcaggccaatacggccagggctttgacttggcgaatcattgttgcgcctccttcaggatttccttgtt                                 <  6:182127‑M2/122‑83 (MQ=255)                                                                                                                                               tCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAggtgcgaaggctccgcaggccaatacggccagggctttgacttggcgaatcattgttgcgcctccttcaggatttccttgtt                                 >  5:182127‑M2/1‑40 (MQ=255)                                                                                                                                               tCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAACGcaacaa                >  5:113960/1‑139 (MQ=255)                                                                                                                                               tCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAACGcaacaa                <  6:113960/139‑1 (MQ=255)                                                                                                                                                  cACCtcgccggtcagggcatcggcggcccagacggcgggtgcgaaggctccgcaggccaatacggccagggctttgacttggcgaatcattgttgcgcctccttcaggatttccttgttcagctcatcgaattcgccgttggcgcggcg   >  1:31478‑M1/1‑4 (MQ=255)                                                                                                                                                  cACCtcgccggtcagggcatcggcggcccacacggcgggtgcgaaggctccgcaggccaatacggccagggctttgacttggcgaatcattgttgcgcctccttcaggatttccttgttcagctcatcgaattcgccgttggcgcggcg   >  7:129235‑M1/1‑4 (MQ=255)                                                                                                                                                  cACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAACGCAACAAGTCGGCATCGGac   <  3:111296/149‑1 (MQ=255)                                                                                                                                                   aCCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAggtgcgaaggctccgcaggccaatacggccagggctttgacttggcgaatcattgttgcgcctccttcaggatttccttgttcagctcatcgaattcgccgttggcgcggcgc  <  3:92405‑M2/149‑114 (MQ=255)                                                                                                                                                     ctcgccggtcagggcatcggcggcccacacggcgggtgcgaaggctccgcaggccaatacggccagggctttgacttggcgaatcattgttgcgcctccttcaggatttcctt                                    >  2:170580‑M1/1‑1 (MQ=255)                                                                                                                                                     ctcgccggtcagggcatcggcggcccacacggcgggtgcgaaggctccgcaggccaatacggccagggctttgacttggcgaatcattgttgcgcctccttcaggatttcctt                                    <  1:170580‑M1/113‑113 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GATCGTTTCGGCATTCGTCCTGACCGCCATCTACGTGCGCCGCGCCAACGGCGAATTCGATGAGCTGAACAAGGAAATCCTGAAGGAGGCGCAACAATGATTCGCCAAGTCAAAGCCCTGGCCGTATTGGCCTGCGGAGCCTTCGCACCCGCCGTGTGGGCCGCCGATGCCCTGACCGGCGAGGTGCAGAAACAACCGCTGAACGTTTCCGCCATCGCCATGTTCGTGGCCTTCGTCGCCTTCACCCTCGGCATCACCTATTGGGCCTCCAAACGCAACAAGTCGGCATCGGACT  >  NC_002947/1942739‑1943033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.