New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2085512 =	32 (0.590)	8 (0.160)	4/248	NT	20.5%	intergenic (+221/‑374)	PP_1864/PP_1865	hypothetical protein/transposase
	?	NC_002947	2256179 =	32 (0.630)					intergenic (+239/‑465)	asd/PP_1990	aspartate‑semialdehyde dehydrogenase/transposase

ATCAAGTAGACATTCATTCACGATGCAGGCGCCTATTCACCTTTCCGCCCTTCCGGCGGGTTACTTTGGTCGTGGC‑CAAAGTAACC‑AAAGCCGTCGGCTCCCCTCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2085663‑2085512 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcttgcGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTG  >  NC_002947/2256179‑2256322                                                                                                                                                                                                                                                                                                            ATCAAGTAGACATTCATTCACGATGCAGGCGCCTATTCACCTTTCCGCCCTTCCGGCGGGTTACTTTGGTCGTGGC‑CAAAGTAACC‑AAAGCCGTCGGCTCCCCTCATCCGGCCCCTACGCAAACCAACCGGGTCCCCTCACACCGGGCT                                                                                                                                                     >  8:59626/1‑149  TCAAGTAGACATTCATTCACGATGCAGGCGCCTATTCACCTTTCCGCCCTTCCGGCGGGTTACTTTGGTCGTGGC‑CAAAGTAACC‑AAAGCCGTCGGCTCCCCTCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTT                                                                                                                                                    <  1:159362/149‑1  TCAAGTAGACATTCATTCACGATGCAGGCGCCTATTCACCTTTCCGCCCTTCCGGCGGGTTACTTTGGTCGTGGC‑CAAAGTAACC‑AAAGCCGTCGGCTCCCCTCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTT                                                                                                                                                    <  7:59626/149‑1            ATTCATTCACGATGCAGGCGCCTATTCACCTTTCCGCCCTTCCGGCGGGTTACTTTGGTCGTGGC‑CAAAGTAACC‑AAAGCCGTCGGCTCCCCTCATCCGGCCCCAAACCTAACCACCCGGGTGCCCACACACCCGGCATGCGGAGGGAG                                                                                                                                          >  4:98693/1‑149                                                                   TGGTCGTGGC‑CAAAGTAACC‑AAAGCCGTCGGCTCCCCTCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCGGAGGGAGGTGACGGGCATGG                                                                                                                             <  7:239243/107‑1                                                                   TGGTCGTGGC‑CAAAGTAACC‑AAAGCCGTCGGCTCCCCTCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCGGAGGGAGGTGACGGGCATGG                                                                                                                             >  8:239243/1‑107                                                                    tGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTGCGCTACGCTCCGGGGTCCCCTCGCTCCGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAACGCTGGGCCCCAGGATGGGGCCTGCAGC                                                                                     <  8:258629/147‑1                                                                      TCGTGGC‑CAAAGTAACC‑AAAGCCGTCGGCTCCCCTCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGC                                                                                                                                                      <  7:207024/79‑1                                                                                          AAGCCGTCGGCTCCCCTCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCC                                                              <  3:98693/149‑1                                                                                           aaacgctGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTCCGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCG                                                             <  7:138392/142‑1                                                                                             CCGTCCGCTCCCATCATCCGGCCCCTGCGCTACGCTCCGGGGTCCCCTCGCTCCGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCGGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGA                                                           <  7:269265/149‑1                                                                                                  GGCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCAGGGCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAG                                                      <  4:11154/149‑1                                                                                                                                                      CTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTG  >  8:64972/1‑149                                                                                                                                                                                                                                                                                                            ATCAAGTAGACATTCATTCACGATGCAGGCGCCTATTCACCTTTCCGCCCTTCCGGCGGGTTACTTTGGTCGTGGC‑CAAAGTAACC‑AAAGCCGTCGGCTCCCCTCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2085663‑2085512 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcttgcGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTG  >  NC_002947/2256179‑2256322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.