| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2333832 = | 73 (1.360) | 4 (0.080) | 3/256 | NT | 5.8% | coding (764/1185 nt) | fadA | 3‑ketoacyl‑CoA thiolase |
| ? | NC_002947 | 2333892 = | 60 (1.150) | coding (824/1185 nt) | fadA | 3‑ketoacyl‑CoA thiolase | |||||
CCCAGGGCCGCGATGCCCGAGCGCGCCGCCAGCGCACCTTCCATCAGCACGCAGGCACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2333892‑2333832‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggGGCTTTACCGCGGTATCGCCGTGGCTGGCCTGGCCCCCGAGGAAATGGGCATCGGCCCGGTGTTGGCGGTGCCCAAGCTACTGCGCCAGCAGGGCCTGACGGTAGACGATATCGGGCTATGGGAGCTGAATGAGGCGTTTGCCTGC > NC_002947/2333892‑2334037 CCCAGGGCCGCGATGCCCGAGCGCGCCGCCAGCGCACCTTCCATCAGCACGCAGGCACTGGGGCTTTACCGCGGTATCGCCGTGGCTGGCCTGGCCCCCGAGGAAATGGGCATCGGCCCGGTGTTGGCGGTGCCCAAGCTACTGCGC > 6:119661/1‑147CCCAGGGCCGCGATGCCCGAGCGCGCCGCCAGCGCACCTTCCATCAGCACGCAGGCACTGGGGCTTTACCGCGGTATCGCCGTGGCTGGCCTGGCCCCCGAGGAAATGGGCATCGGCCCGGTGTTGGCGGTGCCCAAGCTACTGCGC > 6:151361/1‑147 CCAGGGCCGCGATGCCCGAGCGCGCCGCCAGCGCACCTTCCATCAGCACGCAGGCACTGGGGCTTTACCGCGGTATCGCCGTGGCTGGCCTGGCCCCCGAGGAAATGGGCATCGGCCCGGTGTTGGCGGTGCCCAAGCTACTGCGCCAG > 8:145943/1‑149 CGCGATGCCCGAGCGCGCCGCCAGCGCACCTTCCATCAGCACGCAGGCACTGGGGCTTTACCGCGGTATCGCCGTGGCTGGCCTGGCCCCCGAGGAAATGGGCATCGGCCCGGTGTTGGCGGTGCCCAAGCTACTGCGCCAGCAGGGCC < 7:145943/149‑1 ACTGGGGCTTTACCGCGGTATCGCCGTGGCTGGCCTGGCCCCCGAGGAAATGGGCATCGGCCCGGTGTTGGCGGTGCCCAAGCTACTGCGCCAGCAGGGCCTGACGGTAGACGATATCGGGCTATGGGAGCTGAATGAGGCGTTTGCCT < 5:119661/149‑1 CTGGGGCTTTACCGCGGTATCGCCGTGGCTGGCCTGGCCCCCGAGGAAATGGGCATCGGCCCGGTGTTGGCGGTGCCCAAGCTACTGCGCCAGCAGGGCCTGACGGTAGCCGATATCGGGCTATGGGAGCTGAATGAGGCGTTTGCCTG > 8:171218/1‑149 GGGCTTTACCGCGGTATCGCCGTGGCTGGCCTGGCCCCCGAGGAAATGGGCATCGGCCCGGTGTTGGCGGTGCCCAAGCTACTGCGCCAGCAGGGCCTGACGGTAGACGATATCGGGCTATGGGAGCTGAATGAGGCGTTTGCCTGC < 7:289177/147‑1 CCCAGGGCCGCGATGCCCGAGCGCGCCGCCAGCGCACCTTCCATCAGCACGCAGGCACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2333892‑2333832‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggGGCTTTACCGCGGTATCGCCGTGGCTGGCCTGGCCCCCGAGGAAATGGGCATCGGCCCGGTGTTGGCGGTGCCCAAGCTACTGCGCCAGCAGGGCCTGACGGTAGACGATATCGGGCTATGGGAGCTGAATGAGGCGTTTGCCTGC > NC_002947/2333892‑2334037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |