| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2382486 | 42 (0.780) | 4 (0.080) | 4/250 | NT | 8.6% | coding (1411/1671 nt) | PP_2091 | serine/threonine‑protein kinase |
| ? | NC_002947 | = 2382538 | 45 (0.880) | coding (1359/1671 nt) | PP_2091 | serine/threonine‑protein kinase | |||||
CGGCTGGGCAGTTCCTGGCGGTCGCCGCGCTCGAGCAGCAGCAACCAGTGTTCGGCGGTTTCGAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTGACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2382332‑2382486‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccggACACTACCCGTACGGCGAGGTAGAGGCCTTCCAGCGCCCGCGCTTCGGCCAGCCGGTCAACGCCGCGCGCTACCGACCCGACCTGCCGGAATGGCTGCAGCACAACCTGCTGCAGGCCGTGGCGAGCGACCCGGCGCAGCGCTTCGA < NC_002947/2382538‑2382392 CGGCTGGGCAGTTCCTGGCGGTCGCCGCGCTCGAGCAGCAGCAACCAGTGTTCGGCGGTTTCGAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTT < 6:273757/149‑1CGGCTGGGCAGTTCCTGGCGGTCGCCGCGCTCGAGCAGCAGCAACCAGTGTTCGGCGGTTTCGAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTT < 4:115970/149‑1 CTGGGCAGTTCCTGGCGGTCGCCGCGCTCGAGCAGCAGCAACCAGTGTTCGGCGGTTTCGAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTGAC < 8:266223/149‑1 GGCAGTTCCTGGCGGTCGCCGCGCTCGAGCAGCAGCAACCAGTGTTCGGCGGTTTCGAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTGACC < 3:157765/147‑1 GGCAGTTCCTGGCGGTCGCCGCGCTCGAGCAGCAGCAACCAGTGTTCGGCGGTTTCGAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTGACC < 3:238870/147‑1 GGCAGTTCCTGGCGGTCGCCGCGCTCGAGCAGCAGCAACCAGTGTTCGGCGGTTTCGAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTGACC > 4:157765/1‑147 CAGTTCCTGGCGGTCGCCGCGCTCGAGCAGCAGCAACCAGTGTTCGGCGGTTTCGAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTGACC < 3:15650/145‑1 CAGTTCCTGGCGGTCGCCGCGCTCGAGCAGCAGCAACCAGTGTTCGGCGGTTTCGAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTGACC > 4:15650/1‑145 TGGCGGTCGCCGCGCTCGAGCAGCAGCAACCAGTGTTCGGCGGTTTCGAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTG > 3:212977/1‑135 TGGCGGTCGCCGCGCTCGAGCAGCAGCAACCAGTGTTCGGCGGTTTCGAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTG < 4:212977/135‑1 TCGAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTGACCGGACACTACCCGTACGGCGAGGTAGAGGCCTTCCAGCGCCCGCGCTTCGGCCAGCC > 1:233604/1‑149 GAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTGACCGGACACTACCCGTACGGCGAGGTAGAGGCCTTCCAGCGCCCGCGCTTCGGCCAGC < 7:290602/146‑1 GAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTGACCGGACACTACCCGTACGGCGAGGTAGAGGCCTTCCAGCGCCCGCGCTTCGGCCAGC > 8:290602/1‑146 GCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTGACCGGACACTACCCGTACGGCGAGGTAGAGGCCTTCCAGCGCCCGCGCTTCGGCCAGCCGGTCAAC < 2:233604/149‑1 CCGGACACTACCCGTACGGCGAGGTAGAGGCCTTCCAGCGCCCGCGCTTCGGCCAGCCGGTCAACGCCGCGCGCTACCGACCCGACCTGCCGGAATGGCTGCAGCACAACCTGCTGCAGGCCGTGGCGAGCGACCCGGCGCAGCGCTTC < 4:187655/149‑1 CCGGACACTACCCGTACGGCGAGGTAGAGGCCTTCCAGCGCCCGCGCTTCGGCCAGCCGGTCAACGCCGCGCGCTACCGACCCGACCTGCCGGAATGGCTGCAGCACAACCTGCTGCAGGCCGTGGCGAGCGACCCGGCGCAGCGCTTC < 4:109979/149‑1 CCGGACACTACCCGTACGGCGAGGTAGAGGCCTTCCAGCGCCCGCGCTTCGGCCAGCCGGTCAACGCCGCGCGCTACCGACCCGACCTGCCGGAATGGCTGCAGCACAACCTGCTGCAGGCCGTGGCGAGCGACCCGGCGCAGCGCTTC < 1:21999/149‑1 GGACACTACCCGTACGGCGAGGTAGAGGCCTTCCAGCGCCCGCGCTTCGGCCAGCCGGTCAACGCCGCGCGCTACCGACCCGACCTGCCGGAATGGCTGCAGCACAACCTGCTGCAGGCCGTGGCGAGCGACCCGGCGCAGCGCTTCGA < 6:15541/149‑1 CGGCTGGGCAGTTCCTGGCGGTCGCCGCGCTCGAGCAGCAGCAACCAGTGTTCGGCGGTTTCGAAGCGCTGCGCCGGGTCGCTCGCCACGGCCTGCAGCAGGTTGTGCTGCAGCCATTCCGGCAGGTCGGGTCGGTAGCGCGCGGCGTTGACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2382332‑2382486‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccggACACTACCCGTACGGCGAGGTAGAGGCCTTCCAGCGCCCGCGCTTCGGCCAGCCGGTCAACGCCGCGCGCTACCGACCCGACCTGCCGGAATGGCTGCAGCACAACCTGCTGCAGGCCGTGGCGAGCGACCCGGCGCAGCGCTTCGA < NC_002947/2382538‑2382392 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |