| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2491753 = | 39 (0.720) | 4 (0.080) | 4/250 | NT | 8.9% | coding (1176/2883 nt) | PP_2185 | formate dehydrogenase subunit alpha |
| ? | NC_002947 | 2491796 = | 45 (0.880) | coding (1219/2883 nt) | PP_2185 | formate dehydrogenase subunit alpha | |||||
TACGCCGTGGGTCGATCACGATCAGCCGCGCCCCTTGGCGCAGGCGGCGCTTGAGTTGCGAGCCGAACACCGGGTGCGCATCGGTGGGGTTGGCGCCAATCACCAGCACAACGTCGGCCTGCATCACCGAGTCGAAGCTTTGCGTGCCGGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2491907‑2491753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgacGTTGTGCTGGTGATTGGCGCCAACCCCACCGATGCGCACCCGGTGTTCGGCTCGCAACTCAAGCGCCGCCTGCGCCAAGGGGCGCGGCTGATCGTGATCGACCCACGGCGTATCGACCTGGTCGACTCGCCGCACGCCCGCG > NC_002947/2491796‑2491937 TACGCCGTGGGTCGATCACGATCAGCCGCGCCCCTTGGCGCAGGCGGCGCTTGAGTTGCGAGCCGAACACCGGGTGCGCATCGGTGGGGTTGGCGCCAATCACCAGCACAACGTCGGCCTGCATCACCGAGTCGAAGCTTTGCGTGCCG < 7:86937/149‑1 GCCGTGGGTCGATCACGATCAGCCGCGCCCCTTGGCGCAGGCGGCGCTTGATTTGCGAGCCGAACACCGGGTGCGCATCGGTGTGGTTGTCTCCAATCACCAGCACAACGTCGGCCTGCATCACCGAGTCGATGCTTTGCGTGCCGGCC < 2:297682/149‑1 CGTGGGTCGATCACGATCAGCCGCGCCCCTTGGCGCAGGCGGCGCTTGAGTTGCGAGCCGAACACCGGGTGCGCATCGGTGGGGTTGGCGCCAATCACCAGCACAACGTCGGCCTGCATCACCGAGTCGAAGCTTTGCGTGCCGGCCGA > 7:222720/1‑149 GCCGCGCCCCTTGGCGCAGGCGGCGCTTGAGTTGCGAGCCGAACACCGGGTGCGCATCGGTGGGGTTGGCGCCAATCACCAGCACAACGTCGGCCTGCATCACCGAGTCGAAGCTTTGCGTGCCGGCCG > 5:217541/1‑129 GCCGCGCCCCTTGGCGCAGGCGGCGCTTGAGTTGCGAGCCGAACACCGGGTGCGCATCGGTGGGGTTGGCGCCAATCACCAGCACAACGTCGGCCTGCATCACCGAGTCGAAGCTTTGCGTGCCGGCCG < 6:217541/129‑1 GCGCAGGCGGCGCTTGAGTTGCGAGCCGAACACCGGGTGCGCATCGGTGGGGTTGGCGCCAATCACCAGCACAACGTCGGCCTGCATCACCGAGTCGAAGCTTTGCGTGCCGGC > 1:244288/1‑114 GCGCAGGCGGCGCTTGAGTTGCGAGCCGAACACCGGGTGCGCATCGGTGGGGTTGGCGCCAATCACCAGCACAACGTCGGCCTGCATCACCGAGTCGAAGCTTTGCGTGCCGGC < 2:244288/114‑1 CACAACGTCGGCCTGCATCACCGAGTCGAAGCTTTGCGTGCCGGCCGACGTTGTGCTGGTGATTGGCGCCAACCCCACCGATGCGCACCCGGTGTTCGGCTCGCAACTCAAGCGCCGCCTGCGCCAAGGGGCGCGGCTGATCGTGATC > 5:261999/1‑148 CGGCCTGCATCACCGAGTCGAAGCTTTGCGTGCCGGCCGACGTTGTGCTGGTGATTGGCGCCAACCCCACCGATGCGCACCCGGTGTTCGGCTCGCAACTCAAGCGCCGCCTGCGCCAAGGGGCGCGGCTGA > 5:15511/1‑132 CGGCCTGCATCACCGAGTCGAAGCTTTGCGTGCCGGCCGACGTTGTGCTGGTGATTGGCGCCAACCCCACCGATGCGCACCCGGTGTTCGGCTCGCAACTCAAGCGCCGCCTGCGCCAAGGGGCGCGGCTGA < 6:15511/132‑1 TCGAAGCTTTGCGTGCCGGCCGACGTTGTGCTGGTGATTGGCGCCAACCCCACCGATGCGCACCCGGTGTTCGGCTCGCAACTCAAGCGCCGCCTGCGCCAAGGGGCGCGGCTGATCGTGATCGACCCACGGCGTATCGACCTGGTCGA < 6:261999/149‑1 GGCCGACGTTGTGCTGGTGATTGGCGCCAACCCCACCGATGCGCACCCGGTGTTCGGCTCGCAACTCAAGCGCCGCCTGCGCCAAGGGGCGCGGCTGATCGTGGTCGACCCACGGCGTATCGACCTGGTCGACTCGCCGCACGCCCGCG < 3:13036/149‑1 TACGCCGTGGGTCGATCACGATCAGCCGCGCCCCTTGGCGCAGGCGGCGCTTGAGTTGCGAGCCGAACACCGGGTGCGCATCGGTGGGGTTGGCGCCAATCACCAGCACAACGTCGGCCTGCATCACCGAGTCGAAGCTTTGCGTGCCGGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2491907‑2491753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgacGTTGTGCTGGTGATTGGCGCCAACCCCACCGATGCGCACCCGGTGTTCGGCTCGCAACTCAAGCGCCGCCTGCGCCAAGGGGCGCGGCTGATCGTGATCGACCCACGGCGTATCGACCTGGTCGACTCGCCGCACGCCCGCG > NC_002947/2491796‑2491937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |