New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2781785 =	46 (0.850)	3 (0.060)	3/248	NT	6.0%	coding (581/1218 nt)	iscS‑II	cysteine desulfurase
	?	NC_002947	2781834 =	51 (1.010)					coding (532/1218 nt)	iscS‑II	cysteine desulfurase

CCCGCCTGGCAGCGGATGCCGATGGCCTGATCCAGCCTGCAAGTGTGCAGGCAGCGT‑TGCGCGCTGACACCCGCCTGGTATCGCTGATGGCGGTCAACAACGAACTGGGCACGGTCACCGATTTTGCCGCGATCGGCGAGCAGGTGCGTGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2781938‑2781785 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgcccaGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGCCAGGCGGGTGACGGCCCAGCCCTGACGTTCCAGCTCGGCCACGGTGTCGA  >  NC_002947/2781834‑2781980                                                                                                                                                                                                                                                                                                                CCCGCCTGGCAGCGGATGCCGATGGCCTGATCCAGCCTGCAAGTGTGCAGGCAGCGT‑TGCGCGCTGACACCCGCCTGGTATCGCTGATGGCGGTCAACAACGAACTGGGCACGGTCACCGATTTTGCCGCGATCGGCGAGCAGGTGCGT                                                                                                                                                          <  5:7386/149‑1                          CCTGATCCAGCCTGCAAGTGTGCAGGCAGCGTGTGCGCGCTGACACCCGCCTGGTATCGCTGATGGCGGTCAACAACGAACTGGGCACGGTCACCGATTTTGCCGCGATCGGCGAGCAGGTGCGTGC                                                                                                                                                        >  1:213475/1‑127                          CCTGATCCAGCCTGCAAGTGTGCAGGCAGCGT‑TGCGCGCTGACACCCGCCTGGTATCGCTGATGGCGGTCAACAACGAACTGGGCACGGTCACCGATTTTGCCGCGATCGGCGAGCAGGTGCGTGC                                                                                                                                                        <  2:213475/126‑1                                                                                                         ACTGGGCACGGTCACCGATTTTGCCGCGATCGGCGAGCAGGTGCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGC                                                    >  8:203906/1‑148                                                                                                             GGCACGGTCACCGATTTTGCCGCGATCGGCGAGCAGGTGCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGCCAGGC                                               >  1:302831/1‑149                                                                                                               CACGGTCACCGATTTTGCCGCGATCGGCGAGCAGGTGCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGCCAGGCGG                                             <  7:203906/149‑1                                                                                                                                                        CCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGCCAGGCGGGTGACGGCCCAGCCCTGACGTTCCAGCTCGGCCACGGTGTC    <  6:43762/149‑1                                                                                                                                                         CCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGCCAGGCGGGTGACGGCCCAGCCCTGACGTTCCAGCTCGGCCACGGTGTC    >  3:107981/1‑148                                                                                                                                                          CAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGCCAGGCGGGTGACGGCCCAGCCCTGACGTTCCAGCTCGGCCACGGTGTCGA  <  2:90070/149‑1                                                                                                                                                          CAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGCCAGGCGGGTGACGGCCCAGCCCTGACGTTCCAGCTCGGCCACGGTGTCGA  <  4:285063/149‑1                                                                                                                                                          CAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGCCAGGCGGGTGACGGCCCAGCCCTGACGTTCCAGCTCGGCCACGGTGTC    >  3:285063/1‑147                                                                                                                                                          CAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGCCAGGCGGGTGACGGCCCAGCCCTGACGTTCCAGCTCGGCCACGGTGTC    >  7:79134/1‑147                                                                                                                                                          CAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGCCAGGCGGGTGACGGCCCAGCCCTGACGTTCCAGATCGGCCACGGTGTC    >  1:317152/1‑147                                                                                                                                                                                                                                                                                                                CCCGCCTGGCAGCGGATGCCGATGGCCTGATCCAGCCTGCAAGTGTGCAGGCAGCGT‑TGCGCGCTGACACCCGCCTGGTATCGCTGATGGCGGTCAACAACGAACTGGGCACGGTCACCGATTTTGCCGCGATCGGCGAGCAGGTGCGTGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2781938‑2781785 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgcccaGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGCCAGGCGGGTGACGGCCCAGCCCTGACGTTCCAGCTCGGCCACGGTGTCGA  >  NC_002947/2781834‑2781980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.