New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2781785 = | 46 (0.850) | 3 (0.060) | 3/248 | NT | 6.0% | coding (581/1218 nt) | iscS‑II | cysteine desulfurase |
? | NC_002947 | 2781834 = | 51 (1.010) | coding (532/1218 nt) | iscS‑II | cysteine desulfurase |
GCGCGCGGCCCGACATACAGCGCGCCGATGCCTTTCGGCCCGTAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGC > NC_002947/2781638‑2781930 | tcgacaccgtggccgagctggaacgtcagggctgggccgtcacccgcctggcagcggatgccgatggcctgatccagcctgcaagtgtgcaggcagcgttgcgcgctgacacccgcctggtatcgctgatggcggtcaacaacgaacTg < 4:285063‑M1/2‑1 (MQ=255) tcgacaccgtggccgagctggaacgtcagggctgggccgtcacccgcctggcagcggatgccgatggcctgatccagcctgcaagtgtgcaggcagcgttgcgcgctgacacccgcctggtatcgctgatggcggtcaacaacgaacTg < 2:90070‑M1/2‑1 (MQ=255) cgcgcgGCCCGACATACAGCGCGCGGTTGCCTTTCGGCCGGTAGACGTTGTGCGCCGAAATAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCTCGGCCTGCGCGGCTTCCACGTGCAGCAGGGCACCGTgg < 5:89546/149‑1 (MQ=255) cgcgcgGCCCGACATACAGCGCGCCGATGCCTTTCGGCCCGTAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTgg < 3:254249/149‑1 (MQ=255) gacaccgtggccgatctggaacgtcagggctgggccgtcacccgcctggcagcggatgccgatggcctgatccagcctgcaagtgtgcaggcagcgttgcgcgctgacacccgcctggtatcgctgatggcggtcaacaacgaacTg > 1:317152‑M1/146‑147 (MQ=255) gacaccgtggccgagctggaacgtcagggctgggccgtcacccgcctggcagcggatgccgatggcctgatccagcctgcaagtgtgcaggcagcgttgcgcgctgacacccgcctggtatcgctgatggcggtcaacaacgaacTggg < 6:43762‑M1/4‑1 (MQ=255) gacaccgtggccgagctggaacgtcagggctgggccgtcacccgcctggcagcggatgccgatggcctgatccagcctgcaagtgtgcaggcagcgttgcgcgctgacacccgcctggtatcgctgatggcggtcaacaacgaacTgg > 3:107981‑M1/146‑148 (MQ=255) gacaccgtggccgagctggaacgtcagggctgggccgtcacccgcctggcagcggatgccgatggcctgatccagcctgcaagtgtgcaggcagcgttgcgcgctgacacccgcctggtatcgctgatggcggtcaacaacgaacTg > 3:285063‑M1/146‑147 (MQ=255) gacaccgtggccgagctggaacgtcagggctgggccgtcacccgcctggcagcggatgccgatggcctgatccagcctgcaagtgtgcaggcagcgttgcgcgctgacacccgcctggtatcgctgatggcggtcaacaacgaacTg > 7:79134‑M1/146‑147 (MQ=255) gcgGCCCGACATACAGCGCGCCGATGCCTTTCGGCCCGTAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGgca > 6:4680/1‑149 (MQ=255) cgGCCCGACATACAGCGCGCCGATGCCTTTCGGCCCGTAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGGCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGgcac > 1:261764/1‑149 (MQ=255) ccGACATACAGCGCGCCGATGCCTTTCGGCCCGTAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGgcacgcac < 8:70633/149‑1 (MQ=255) aCAGCGCGCCGATGCCTTTCGGCCCGTAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCg > 4:78948/1‑149 (MQ=255) cGATGCCTTTCGGCCCGTAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATcgcg < 8:81664/149‑1 (MQ=255) gCCTTTCGGCCCGTAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGgca < 6:178383/124‑1 (MQ=255) gCCTTTCGGCCCGTAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGgca > 5:178383/1‑124 (MQ=255) gCCTTTCGGCCCGTAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCa > 2:81306/1‑148 (MQ=255) ggCCCGTAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGt < 3:122712/149‑1 (MQ=255) cGTAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGAcc < 2:186649/149‑1 (MQ=255) tAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGt < 4:323037/149‑1 (MQ=255) ccgcctggcagcggatgccgatggcctgatccagcctgcaagtgtgcaggcagcgttgcgcgctgacacccgcctggtatcgctgatggcggtcaacaacgaacTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTg < 7:203906‑M1/45‑1 (MQ=255) aGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTg > 8:170715/1‑149 (MQ=255) gcctggcagcggatgccgatggcctgatccagcctgcaagtgtgcaggcagcgttgcgcgctgacacccgcctggtatcgctgatggcggtcaacaacgaacTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGcc > 1:302831‑M1/103‑149 (MQ=255) cccTTTTGCTCAGAAAAAGAGCTCAGGTCCACTGCCATCGTACGCATGTCGATAGCCAGCTTACCCACGGACTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCTGTGACCGTGcc < 6:234603/148‑1 (MQ=255) cTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCa < 3:78948/149‑1 (MQ=255) gtgCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCAcc < 2:234263/109‑1 (MQ=255) gtgCGCCGAAAAAGACATCAGGGACACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGt > 7:211303/1‑148 (MQ=255) gcagcggatgccgatggcctgatccagcctgcaagtgtgcaggcagcgttgcgcgctgacacccgcctggtatcgctgatggcggtcaacaacgaacTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGt > 8:203906‑M1/98‑148 (MQ=255) gcCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCgtt < 5:278750/149‑1 (MQ=255) ccGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCgttg < 7:170715/149‑1 (MQ=255) ccGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCgttg > 5:51523/1‑149 (MQ=255) gAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCgttgtt > 6:147792/1‑149 (MQ=255) aTCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCAt > 4:228718/1‑149 (MQ=255) gTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGc > 1:156603/1‑148 (MQ=255) ggCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATAc > 6:310332/1‑147 (MQ=255) gTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGgt < 8:282264/149‑1 (MQ=255) gCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCa < 8:211303/149‑1 (MQ=255) aGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCGAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAgc > 5:39898/1‑149 (MQ=255) gTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAgcgc < 3:326929/149‑1 (MQ=255) ccAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGct > 8:274739/1‑149 (MQ=255) ccAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGct > 3:153021/1‑149 (MQ=255) ccAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGct < 7:28199/149‑1 (MQ=255) ccACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGcaca > 6:129360/1‑149 (MQ=255) ccACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCACGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGcaca > 1:90070/1‑149 (MQ=255) aCGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACGGTGCCCAGGACGTTGTAGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACt > 1:107648/1‑149 (MQ=255) aCGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATc < 5:258908/105‑1 (MQ=255) aCGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATc > 6:258908/1‑105 (MQ=255) aCGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACt > 5:193069/1‑149 (MQ=255) cGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACtt < 5:129360/149‑1 (MQ=255) ccTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCCGAGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTg > 5:5211/1‑147 (MQ=255) cTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGcgg < 5:177136/149‑3 (MQ=255) cTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAg > 5:239336/1‑149 (MQ=255) aTCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGAt > 4:100805/1‑147 (MQ=255) aTCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCa < 1:81306/149‑1 (MQ=255) ccACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAgg > 7:155268/1‑149 (MQ=255) cACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAgg < 6:39898/148‑1 (MQ=255) aCGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAAAGCTGCCTGCACACTTGCAGGCTGGATCAGGc > 6:239559/1‑148 (MQ=255) agGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATc < 1:2091/149‑1 (MQ=255) cACCGTGGGCACGCACCTGCTCTCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGGCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCt < 5:4680/149‑1 (MQ=255) ccGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGc < 3:228718/149‑1 (MQ=255) ccGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGc < 7:274739/149‑1 (MQ=255) | GCGCGCGGCCCGACATACAGCGCGCCGATGCCTTTCGGCCCGTAGACCTTGTGCGCCGAAAAAGACATCAGGTCCACGGCCATCGTACGCAGGTCGATAGCCAGCTTACCCACGGCCTGCGCGGCATCCACGTGCAGCAGGGCACCGTGGGCACGCACCTGCTCGCCGATCGCGGCAAAATCGGTGACCGTGCCCAGTTCGTTGTTGACCGCCATCAGCGATACCAGGCGGGTGTCAGCGCGCAACGCTGCCTGCACACTTGCAGGCTGGATCAGGCCATCGGCATCCGCTGC > NC_002947/2781638‑2781930 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |