New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2785510 | 46 (0.850) | 5 (0.100) | 5/246 | NT | 10.4% | coding (304/390 nt) | PP_5523 | hypothetical protein |
? | NC_002947 | = 2785556 | 43 (0.860) | coding (350/390 nt) | PP_5523 | hypothetical protein |
CCCTATCTTGAGCAGATGAAACCCGTATGGGGCGGACGAAACCTAAGGCATCGATGCCTACTGATGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCCAAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2785354‑2785510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccaaagtGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGGGGGGAAATTGTCAAGCTCCGCTTCGTTCAACCAACCGAGGCGTAAATGTAACCTTGGGAATGTGACCAAAGCGCTTACTGTACTCATCA < NC_002947/2785556‑2785415 CCCTATCTTGAGCAGATGAAACCCGTATGGGGCGGACGAAACCTAAGGCATCGATGCCTACTGATGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCC > 4:268853/1‑149 CTATCTTGAGCAGATGAAACCCGTATGGGGCGGACGAAACCTAAGGCATCGATGCCTACTGATGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGTTTGACAATTTCCCCC > 3:291671/1‑149 ATCTTGAGCAGATGAAACCCGTATGGGGCGGACGAAACCTAAGGCATCGATGCCTACTGATGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCC > 2:142251/1‑148 CTAAGGCATCGATGCCTACTGATGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCCAAAGTGAGGCAATCAAGATAAGCCAAAGGGCTGCTCCCA > 7:113078/1‑149 CTGATGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCCAAAGTGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTG < 8:113078/149‑1 ATGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCCAAAGTGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGGG < 7:30353/148‑1 GTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCCAAAGTGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGG < 5:242850/138‑1 GTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCCAAAGTGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGG > 6:242850/1‑138 CCCAAAGTGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGGGGGGAAATTGTCAAGCTCCGCTTCGTTCAACCAACCGAGGCGTAAATGTAACCTTGGGAATGTGACCAAAGCGCTTACTGTACTCAT > 8:106730/1‑148 CCAAAGTGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGGGGGGAAATTGTCAAGCTCCGCTTCGTTCAACCAACCGAGGCGTAAATGTAACCTTGGGAATGTGACCAAAGCGCTTACTGTACTCATCA < 2:258531/149‑1 CCAAAGTGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGGGGGGAAATTGTCAAGCTCCGCTTCGTTCAACCAACCGAGGCGTAAATGTAACCTTGGGAATGTGACCAAAGCGCTTACTGTACTCAT > 5:67854/1‑147 CCCTATCTTGAGCAGATGAAACCCGTATGGGGCGGACGAAACCTAAGGCATCGATGCCTACTGATGAGTACAGTAAGCGCTTTGGTCACATTCCCAAGGTTACATTTACGCCTCGGTTGGTTGAACGAAGCGGAGCTTGACAATTTCCCCCCAAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2785354‑2785510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccaaagtGAGGCAATCAAGATCAGCCAAAGGGCTGCTCCCATATCTCGCCTCAACTTTGGGGGGAAATTGTCAAGCTCCGCTTCGTTCAACCAACCGAGGCGTAAATGTAACCTTGGGAATGTGACCAAAGCGCTTACTGTACTCATCA < NC_002947/2785556‑2785415 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |