New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2871432 = | 47 (0.870) | 4 (0.080) | 3/250 | NT | 8.1% | coding (210/657 nt) | PP_2524 | HD domain‑containing protein |
? | NC_002947 | 2871471 = | 46 (0.900) | coding (249/657 nt) | PP_2524 | HD domain‑containing protein |
CTCACGTGTCAGCGGTTCGAACCCCGCCGAGTAACTGTGTGTTTTGATCGCATGCACTACCTGCTCAACACGCCCACTCGGCCAGCCCATCTCAGCAAGGACTGATGCAGCCTTGTTCGCCGACAACGTCGAGGCCTGCCCACGTAACGGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2871585‑2871432 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgaaCAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAGGACAGTGACCGGCTTGA > NC_002947/2871471‑2871617 CTCACGTGTCAGCGGTTCGAACCCCGCCGAGTAACTGTGTGTTTTGATCGCATGCACTACCTGCTCAACACGCCCACTCGGCCAGCCCATCTCAGCAAGGACTGATGCAGCCTTGTTCGCCGACAACGTCGAGGCCTGCCCACGAAACG < 3:94126/149‑1 ACGTGTCAGCGGTTCGAACCCCGCCGAGTAACTGTGTGTTTTGATCGCATGCACTACCTGCTCAACACGCCCACTCGGCCAGCCCATCTCAGCAAGGACTGATGCAGCCTTGTTCGCCGACAACGTCGAGGCCTGCCCACGTAACGGCG < 8:152727/149‑1 TTGTTCGCCGACAACGTCGAGGCCTGCCCACGTAACGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGA > 6:188891/1‑149 TTGTTCGCCGACAACGTCGAGGCCTGCCCACGTAACGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTC > 7:194389/1‑139 TTGTTCGCCGACAACGTCGAGGCCTGCCCACGTAACGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTC < 8:194389/139‑1 GTTCGCCGACAACGTCGAGGCCTGCCCACGTAACGGCGAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACA > 5:95712/1‑149 ccAACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAGGACAGTGTCCGGCTT < 6:95712/147‑1 AACAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAGGACAGTGACCGGCTTGA < 3:162251/149‑1 CTCACGTGTCAGCGGTTCGAACCCCGCCGAGTAACTGTGTGTTTTGATCGCATGCACTACCTGCTCAACACGCCCACTCGGCCAGCCCATCTCAGCAAGGACTGATGCAGCCTTGTTCGCCGACAACGTCGAGGCCTGCCCACGTAACGGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2871585‑2871432 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgaaCAAGGCTGCATCAGTCCTTGCTGAGATGGGCTGGCCGAGTGGGCGTGTTGAGCAGGTAGTGCATGCGATCAAAACACACAGTTACTCGGCGGGGTTCGAACCGCTGACACGTGAGGCCTGCATCCTTCAGGACAGTGACCGGCTTGA > NC_002947/2871471‑2871617 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |